Basic Information | |||
Gene ID | 171068 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Pou2f1; Oct-1, Otf-1, Otf1 | ||
Full Name | POU domain, class 2, transcription factor 1 | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | P31503 | UniGene | Rn.46306 |
PDB | NULL | OMIM | NULL |
KEGG | rno:171068 | UCSC | RGD:621689 |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 10116.ENSRNOP00000004937 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
NP_001094109 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 387 | 461 | 1.80e-23 | Homeodomain-like |
NP_001094109 | Gene3D | G3DSA:1.10.260.40 | IPR010982 | 307 | 377 | 1.20e-40 | Lambda repressor-like, DNA-binding domain |
NP_001094109 | Pfam | PF00046 | IPR001356 | 405 | 461 | 5.50e-17 | Homeobox domain |
NP_001094109 | Pfam | PF00157 | IPR000327 | 304 | 377 | 5.70e-39 | POU-specific |
NP_001094109 | PRINTS | PR00028 | IPR013847 | 322 | 339 | 5.50e-41 | POU domain |
NP_001094109 | PRINTS | PR00028 | IPR013847 | 345 | 358 | 5.50e-41 | POU domain |
NP_001094109 | PRINTS | PR00028 | IPR013847 | 361 | 376 | 5.50e-41 | POU domain |
NP_001094109 | PRINTS | PR00028 | IPR013847 | 403 | 423 | 5.50e-41 | POU domain |
NP_001094109 | PRINTS | PR00028 | IPR013847 | 438 | 453 | 5.50e-41 | POU domain |
NP_001094109 | PRINTS | PR00029 | IPR000972 | 204 | 219 | 1.10e-26 | Octamer-binding transcription factor |
NP_001094109 | PRINTS | PR00029 | IPR000972 | 228 | 243 | 1.10e-26 | Octamer-binding transcription factor |
NP_001094109 | PRINTS | PR00029 | IPR000972 | 252 | 264 | 1.10e-26 | Octamer-binding transcription factor |
NP_001094109 | PRINTS | PR00029 | IPR000972 | 303 | 314 | 1.10e-26 | Octamer-binding transcription factor |
NP_001094109 | ProSitePatterns | PS00027 | IPR017970 | 437 | 460 | - | Homeobox, conserved site |
NP_001094109 | ProSitePatterns | PS00035 | IPR000327 | 321 | 333 | - | POU-specific |
NP_001094109 | ProSitePatterns | PS00465 | IPR000327 | 345 | 358 | - | POU-specific |
NP_001094109 | ProSiteProfiles | PS50071 | IPR001356 | 402 | 462 | 0.00e-00 | Homeobox domain |
NP_001094109 | ProSiteProfiles | PS51179 | IPR000327 | 303 | 377 | 0.00e-00 | POU-specific |
NP_001094109 | SMART | SM00352 | IPR000327 | 303 | 377 | 5.40e-55 | POU-specific |
NP_001094109 | SMART | SM00389 | IPR001356 | 404 | 466 | 1.10e-21 | Homeobox domain |
NP_001094109 | SUPERFAMILY | SSF46689 | IPR009057 | 381 | 463 | 0.00e-00 | Homeodomain-like |
NP_001094109 | SUPERFAMILY | SSF47413 | IPR010982 | 305 | 377 | 0.00e-00 | Lambda repressor-like, DNA-binding domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
NP_001094109 | PF00157 | 3e-39 | Pou | Pou domain - N-terminal to homeobox domain |
NP_001094109 | PF00046 | 2e-17 | Homeobox | Homeobox domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
NP_001094109 | GO:0006351 | biological_process | transcription, DNA-templated |
NP_001094109 | GO:0005634 | cellular_component | nucleus |
NP_001094109 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
NP_001094109 | GO:0043565 | molecular_function | sequence-specific DNA binding |