Basic Information | |||
Gene ID | 172504 | ||
Gene Name | pbrm-1; C26C6.1, CELE_C26C6.1 | ||
Full Name | Protein PBRM-1, isoform a | ||
Organism | Caenorhabditis elegans [6239] |
Cross Reference | |||
UniProt | G5EEY5 | UniGene | Cel.17853 |
PDB | NULL | OMIM | NULL |
KEGG | cel:CELE_C26C6.1 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
C26C6.1a | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 1451 | 1503 | 1.30e-12 | High mobility group box domain |
C26C6.1a | Gene3D | G3DSA:1.20.920.10 | IPR001487 | 197 | 297 | 5.30e-24 | Bromodomain |
C26C6.1a | Gene3D | G3DSA:1.20.920.10 | IPR001487 | 336 | 446 | 1.50e-23 | Bromodomain |
C26C6.1a | Gene3D | G3DSA:1.20.920.10 | IPR001487 | 47 | 147 | 1.90e-18 | Bromodomain |
C26C6.1a | Gene3D | G3DSA:1.20.920.10 | IPR001487 | 533 | 637 | 6.40e-28 | Bromodomain |
C26C6.1a | Gene3D | G3DSA:1.20.920.10 | IPR001487 | 711 | 815 | 4.90e-28 | Bromodomain |
C26C6.1a | Gene3D | G3DSA:1.20.920.10 | IPR001487 | 824 | 929 | 2.20e-10 | Bromodomain |
C26C6.1a | Pfam | PF00439 | IPR001487 | 213 | 284 | 4.10e-16 | Bromodomain |
C26C6.1a | Pfam | PF00439 | IPR001487 | 364 | 434 | 1.60e-16 | Bromodomain |
C26C6.1a | Pfam | PF00439 | IPR001487 | 554 | 625 | 2.70e-19 | Bromodomain |
C26C6.1a | Pfam | PF00439 | IPR001487 | 66 | 135 | 2.30e-11 | Bromodomain |
C26C6.1a | Pfam | PF00439 | IPR001487 | 725 | 802 | 2.50e-19 | Bromodomain |
C26C6.1a | Pfam | PF00505 | IPR009071 | 1453 | 1503 | 1.20e-12 | High mobility group box domain |
C26C6.1a | Pfam | PF01426 | IPR001025 | 1005 | 1112 | 3.00e-16 | Bromo adjacent homology (BAH) domain |
C26C6.1a | Pfam | PF01426 | IPR001025 | 1207 | 1313 | 4.10e-10 | Bromo adjacent homology (BAH) domain |
C26C6.1a | PRINTS | PR00503 | IPR001487 | 569 | 585 | 2.00e-12 | Bromodomain |
C26C6.1a | PRINTS | PR00503 | IPR001487 | 762 | 780 | 2.00e-12 | Bromodomain |
C26C6.1a | PRINTS | PR00503 | IPR001487 | 780 | 799 | 2.00e-12 | Bromodomain |
C26C6.1a | ProSitePatterns | PS00028 | IPR007087 | 1533 | 1556 | - | Zinc finger, C2H2 |
C26C6.1a | ProSiteProfiles | PS50014 | IPR001487 | 210 | 280 | 0.00e-00 | Bromodomain |
C26C6.1a | ProSiteProfiles | PS50014 | IPR001487 | 360 | 429 | 0.00e-00 | Bromodomain |
C26C6.1a | ProSiteProfiles | PS50014 | IPR001487 | 552 | 622 | 0.00e-00 | Bromodomain |
C26C6.1a | ProSiteProfiles | PS50014 | IPR001487 | 61 | 131 | 0.00e-00 | Bromodomain |
C26C6.1a | ProSiteProfiles | PS50014 | IPR001487 | 729 | 799 | 0.00e-00 | Bromodomain |
C26C6.1a | ProSiteProfiles | PS50118 | IPR009071 | 1449 | 1503 | 0.00e-00 | High mobility group box domain |
C26C6.1a | ProSiteProfiles | PS51038 | IPR001025 | 1202 | 1320 | 0.00e-00 | Bromo adjacent homology (BAH) domain |
C26C6.1a | ProSiteProfiles | PS51038 | IPR001025 | 994 | 1113 | 0.00e-00 | Bromo adjacent homology (BAH) domain |
C26C6.1a | SMART | SM00297 | IPR001487 | 190 | 299 | 3.70e-33 | Bromodomain |
C26C6.1a | SMART | SM00297 | IPR001487 | 337 | 448 | 4.10e-38 | Bromodomain |
C26C6.1a | SMART | SM00297 | IPR001487 | 35 | 150 | 6.30e-32 | Bromodomain |
C26C6.1a | SMART | SM00297 | IPR001487 | 525 | 641 | 2.20e-42 | Bromodomain |
C26C6.1a | SMART | SM00297 | IPR001487 | 707 | 818 | 1.50e-42 | Bromodomain |
C26C6.1a | SMART | SM00297 | IPR001487 | 826 | 935 | 1.20e-05 | Bromodomain |
C26C6.1a | SMART | SM00355 | IPR015880 | 1531 | 1555 | 1.70e-04 | Zinc finger, C2H2-like |
C26C6.1a | SMART | SM00355 | IPR015880 | 1568 | 1599 | 3.20e-02 | Zinc finger, C2H2-like |
C26C6.1a | SMART | SM00398 | IPR009071 | 1448 | 1518 | 2.30e-21 | High mobility group box domain |
C26C6.1a | SMART | SM00439 | IPR001025 | 1202 | 1320 | 3.20e-33 | Bromo adjacent homology (BAH) domain |
C26C6.1a | SMART | SM00439 | IPR001025 | 987 | 1113 | 6.50e-38 | Bromo adjacent homology (BAH) domain |
C26C6.1a | SUPERFAMILY | SSF47095 | IPR009071 | 1435 | 1505 | 0.00e-00 | High mobility group box domain |
C26C6.1a | SUPERFAMILY | SSF47370 | IPR001487 | 172 | 300 | 0.00e-00 | Bromodomain |
C26C6.1a | SUPERFAMILY | SSF47370 | IPR001487 | 341 | 457 | 0.00e-00 | Bromodomain |
C26C6.1a | SUPERFAMILY | SSF47370 | IPR001487 | 37 | 152 | 0.00e-00 | Bromodomain |
C26C6.1a | SUPERFAMILY | SSF47370 | IPR001487 | 532 | 641 | 0.00e-00 | Bromodomain |
C26C6.1a | SUPERFAMILY | SSF47370 | IPR001487 | 714 | 818 | 0.00e-00 | Bromodomain |
C26C6.1a | SUPERFAMILY | SSF47370 | IPR001487 | 871 | 934 | 0.00e-00 | Bromodomain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
C26C6.1a | PF00439 | 0 | Bromodomain | Bromodomain |
C26C6.1a | PF01426 | 5.8e-28 | BAH | BAH domain |
C26C6.1a | PF00505 | 1.8e-13 | HMG_box | HMG (high mobility group) box |
C26C6.1a | PF09011 | 2.1e-08 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
C26C6.1a | GO:0003682 | molecular_function | chromatin binding |