Basic Information | |||
Gene ID | 173348 | ||
Gene Name | CELE_F39B2.1, F39B2.1 | ||
Full Name | Protein F39B2.1 | ||
Organism | Caenorhabditis elegans [6239] |
Cross Reference | |||
UniProt | O45494 | UniGene | Cel.22960 |
PDB | NULL | OMIM | NULL |
KEGG | cel:CELE_F39B2.1 | UCSC | F39B2.1 |
Protein Interactions | |
DIP | NULL |
IntAct | O45494 |
MINT | NULL |
STRING | 6239.F39B2.1 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
F39B2.1 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 245 | 271 | 5.70e-07 | Zinc finger C2H2-type/integrase DNA-binding domain |
F39B2.1 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 306 | 341 | 8.30e-07 | Zinc finger C2H2-type/integrase DNA-binding domain |
F39B2.1 | ProSitePatterns | PS00028 | IPR007087 | 182 | 204 | - | Zinc finger, C2H2 |
F39B2.1 | ProSitePatterns | PS00028 | IPR007087 | 247 | 269 | - | Zinc finger, C2H2 |
F39B2.1 | ProSitePatterns | PS00028 | IPR007087 | 359 | 379 | - | Zinc finger, C2H2 |
F39B2.1 | ProSitePatterns | PS00028 | IPR007087 | 385 | 406 | - | Zinc finger, C2H2 |
F39B2.1 | ProSitePatterns | PS00028 | IPR007087 | 415 | 435 | - | Zinc finger, C2H2 |
F39B2.1 | ProSitePatterns | PS00028 | IPR007087 | 442 | 462 | - | Zinc finger, C2H2 |
F39B2.1 | ProSitePatterns | PS00028 | IPR007087 | 473 | 494 | - | Zinc finger, C2H2 |
F39B2.1 | ProSiteProfiles | PS50157 | IPR007087 | 292 | 321 | 0.00e-00 | Zinc finger, C2H2 |
F39B2.1 | ProSiteProfiles | PS50157 | IPR007087 | 357 | 379 | 0.00e-00 | Zinc finger, C2H2 |
F39B2.1 | ProSiteProfiles | PS50157 | IPR007087 | 413 | 436 | 0.00e-00 | Zinc finger, C2H2 |
F39B2.1 | ProSiteProfiles | PS50157 | IPR007087 | 440 | 462 | 0.00e-00 | Zinc finger, C2H2 |
F39B2.1 | ProSiteProfiles | PS50157 | IPR007087 | 471 | 499 | 0.00e-00 | Zinc finger, C2H2 |
F39B2.1 | SMART | SM00355 | IPR015880 | 139 | 163 | 2.00e-02 | Zinc finger, C2H2-like |
F39B2.1 | SMART | SM00355 | IPR015880 | 180 | 204 | 1.60e-03 | Zinc finger, C2H2-like |
F39B2.1 | SMART | SM00355 | IPR015880 | 245 | 269 | 9.80e-04 | Zinc finger, C2H2-like |
F39B2.1 | SMART | SM00355 | IPR015880 | 292 | 316 | 1.10e-03 | Zinc finger, C2H2-like |
F39B2.1 | SMART | SM00355 | IPR015880 | 322 | 342 | 2.90e-01 | Zinc finger, C2H2-like |
F39B2.1 | SMART | SM00355 | IPR015880 | 357 | 379 | 1.40e-04 | Zinc finger, C2H2-like |
F39B2.1 | SMART | SM00355 | IPR015880 | 383 | 406 | 9.10e-03 | Zinc finger, C2H2-like |
F39B2.1 | SMART | SM00355 | IPR015880 | 413 | 435 | 1.50e-04 | Zinc finger, C2H2-like |
F39B2.1 | SMART | SM00355 | IPR015880 | 440 | 462 | 3.00e-06 | Zinc finger, C2H2-like |
F39B2.1 | SMART | SM00355 | IPR015880 | 471 | 494 | 1.60e-04 | Zinc finger, C2H2-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
F39B2.1 | PF13465 | 3.2e-12 | zf-H2C2_2 | Zinc-finger double domain |
F39B2.1 | PF13894 | 1.4e-09 | zf-C2H2_4 | C2H2-type zinc finger |
F39B2.1 | PF00096 | 1.6e-09 | zf-C2H2 | Zinc finger, C2H2 type |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
F39B2.1 | GO:0006351 | biological_process | transcription, DNA-templated |
F39B2.1 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
F39B2.1 | GO:0005634 | cellular_component | nucleus |
F39B2.1 | GO:0003677 | molecular_function | DNA binding |
F39B2.1 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9597 | Pan paniscus | 100992088 | 10090 | Mus musculus | 102423 |
13735 | Pelodiscus sinensis | 102458478 | 7425 | Nasonia vitripennis | 100123167 |
7029 | Acyrthosiphon pisum | 100164158 | 9986 | Oryctolagus cuniculus | 100341578 |
9601 | Pongo abelii | 100448346 | 9823 | Sus scrofa | 100518324 |
30195 | Bombus terrestris | 100650520 | 8128 | Oreochromis niloticus | 100702391 |
132113 | Bombus impatiens | 100748248 | 10029 | Cricetulus griseus | 100756963 |
7463 | Apis florea | 100865171 | 143995 | Megachile rotundata | 100882300 |
9555 | Papio anubis | 101002073 | 39432 | Saimiri boliviensis | 101048704 |
9669 | Mustela putorius furo | 101693730 | 8083 | Xiphophorus maculatus | 102230720 |
9598 | Pan troglodytes | 451604 | 7227 | Drosophila melanogaster | 47718 |
7070 | Tribolium castaneum | 659857 | 9544 | Macaca mulatta | 703763 |
7460 | Apis mellifera | 725303 | 28377 | Anolis carolinensis | ENSACAG00000002495 |
7719 | Ciona intestinalis | ENSCING00000024005 | 10141 | Cavia porcellus | ENSCPOG00000006488 |
51511 | Ciona savignyi | ENSCSAVG00000007751 | 10020 | Dipodomys ordii | ENSDORG00000001981 |
9796 | Equus caballus | ENSECAG00000024938 | 9685 | Felis catus | ENSFCAG00000001165 |
69293 | Gasterosteus aculeatus | ENSGACG00000010410 | 9031 | Gallus gallus | ENSGALG00000006806 |
9595 | Gorilla gorilla | ENSGGOG00000008087 | 8049 | Gadus morhua | ENSGMOG00000005447 |
7897 | Latimeria chalumnae | ENSLACG00000017952 | 9785 | Loxodonta africana | ENSLAFG00000017500 |
9315 | Macropus eugenii | ENSMEUG00000015482 | 9103 | Meleagris gallopavo | ENSMGAG00000002682 |
30608 | Microcebus murinus | ENSMICG00000002733 | 59463 | Myotis lucifugus | ENSMLUG00000000455 |
13616 | Monodelphis domestica | ENSMODG00000013267 | 9258 | Ornithorhynchus anatinus | ENSOANG00000006444 |
9978 | Ochotona princeps | ENSOPRG00000016333 | 8090 | Oryzias latipes | ENSORLG00000005444 |
132908 | Pteropus vampyrus | ENSPVAG00000005598 | 10116 | Rattus norvegicus | ENSRNOG00000009499 |
42254 | Sorex araneus | ENSSARG00000011633 | 9305 | Sarcophilus harrisii | ENSSHAG00000009681 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000014457 | 99883 | Tetraodon nigroviridis | ENSTNIG00000011746 |
31033 | Takifugu rubripes | ENSTRUG00000016621 | 9478 | Tarsius syrichta | ENSTSYG00000012226 |
9739 | Tursiops truncatus | ENSTTRG00000002809 | 8364 | Xenopus tropicalis | ENSXETG00000024631 |
9913 | Bos taurus | ENSBTAG00000015015 | 7955 | Danio rerio | ENSDARG00000004851 |
9813 | Procavia capensis | ENSPCAG00000013133 | 59729 | Taeniopygia guttata | ENSTGUG00000000357 |