Basic Information | |||
Gene ID | 174552 | ||
Gene Name | egl-43; CELE_R53.3, R53.3 | ||
Full Name | Protein EGL-43, isoform a | ||
Organism | Caenorhabditis elegans [6239] |
Cross Reference | |||
UniProt | Q22024 | UniGene | Cel.15534 |
PDB | NULL | OMIM | NULL |
KEGG | cel:CELE_R53.3 | UCSC | R53.3a |
Protein Interactions | |
DIP | NULL |
IntAct | Q22024 |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
R53.3a | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 159 | 188 | 1.40e-07 | Zinc finger C2H2-type/integrase DNA-binding domain |
R53.3a | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 189 | 210 | 5.10e-07 | Zinc finger C2H2-type/integrase DNA-binding domain |
R53.3a | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 444 | 463 | 7.00e-10 | Zinc finger C2H2-type/integrase DNA-binding domain |
R53.3a | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 464 | 492 | 7.40e-14 | Zinc finger C2H2-type/integrase DNA-binding domain |
R53.3a | Pfam | PF00096 | IPR007087 | 159 | 181 | 1.60e-02 | Zinc finger, C2H2 |
R53.3a | Pfam | PF00096 | IPR007087 | 187 | 209 | 6.80e-03 | Zinc finger, C2H2 |
R53.3a | ProSitePatterns | PS00028 | IPR007087 | 161 | 181 | - | Zinc finger, C2H2 |
R53.3a | ProSitePatterns | PS00028 | IPR007087 | 189 | 209 | - | Zinc finger, C2H2 |
R53.3a | ProSitePatterns | PS00028 | IPR007087 | 446 | 466 | - | Zinc finger, C2H2 |
R53.3a | ProSitePatterns | PS00028 | IPR007087 | 474 | 495 | - | Zinc finger, C2H2 |
R53.3a | ProSiteProfiles | PS50157 | IPR007087 | 159 | 186 | 0.00e-00 | Zinc finger, C2H2 |
R53.3a | ProSiteProfiles | PS50157 | IPR007087 | 187 | 214 | 0.00e-00 | Zinc finger, C2H2 |
R53.3a | ProSiteProfiles | PS50157 | IPR007087 | 444 | 471 | 0.00e-00 | Zinc finger, C2H2 |
R53.3a | ProSiteProfiles | PS50157 | IPR007087 | 472 | 500 | 0.00e-00 | Zinc finger, C2H2 |
R53.3a | SMART | SM00355 | IPR015880 | 159 | 181 | 2.50e-05 | Zinc finger, C2H2-like |
R53.3a | SMART | SM00355 | IPR015880 | 187 | 209 | 1.80e-04 | Zinc finger, C2H2-like |
R53.3a | SMART | SM00355 | IPR015880 | 213 | 233 | 6.80e-01 | Zinc finger, C2H2-like |
R53.3a | SMART | SM00355 | IPR015880 | 444 | 466 | 1.60e-07 | Zinc finger, C2H2-like |
R53.3a | SMART | SM00355 | IPR015880 | 472 | 495 | 1.50e-06 | Zinc finger, C2H2-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
R53.3a | PF00096 | 2.6e-19 | zf-C2H2 | Zinc finger, C2H2 type |
R53.3a | PF13465 | 5.7e-14 | zf-H2C2_2 | Zinc-finger double domain |
R53.3a | PF13894 | 1.9e-13 | zf-C2H2_4 | C2H2-type zinc finger |
R53.3a | PF12171 | 1.3e-10 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding |
R53.3a | PF13912 | 1.1e-06 | zf-C2H2_6 | C2H2-type zinc finger |
R53.3a | PF02892 | 3.9e-05 | zf-BED | BED zinc finger |
R53.3a | PF12874 | 0.00034 | zf-met | Zinc-finger of C2H2 type |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
R53.3a | GO:0006351 | biological_process | transcription, DNA-templated |
R53.3a | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
R53.3a | GO:0005634 | cellular_component | nucleus |
R53.3a | GO:0003677 | molecular_function | DNA binding |
R53.3a | GO:0046872 | molecular_function | metal ion binding |