Basic Information
Gene ID 180243
Gene Name CELE_Y39B6A.36, Y39B6A.36
Full Name Protein Y39B6A.36
Organism Caenorhabditis elegans [6239]

Cross Reference
UniProt Q8MYM8 UniGene Cel.1831
PDB NULL OMIM NULL
KEGG cel:CELE_Y39B6A.36 UCSC Y39B6A.36

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 6239.Y39B6A.36

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
Y39B6A.36 Gene3D G3DSA:1.10.10.10 IPR011991 189 257 1.50e-32 Winged helix-turn-helix DNA-binding domain
Y39B6A.36 PANTHER PTHR10445 IPR003196 9 263 0.00e-00 Transcription initiation factor IIF, beta subunit
Y39B6A.36 Pfam PF02270 IPR003196 8 254 3.40e-68 Transcription initiation factor IIF, beta subunit
Y39B6A.36 PIRSF PIRSF015849 IPR016640 1 263 3.90e-156 Transcription initiation factor IIF, beta subunit, subgroup
Y39B6A.36 SUPERFAMILY SSF50916 IPR011039 6 133 0.00e-00 Transcription Factor IIF, Rap30/Rap74, interaction

Pfam Annotation
Protein Pfam ID E.value Name Description
Y39B6A.36 PF02270 0 TFIIF_beta Transcription initiation factor IIF, beta subunit

Gene Ontology Annotation
Protein Entry Name Space Description
Y39B6A.36 GO:0006355 biological_process regulation of transcription, DNA-templated
Y39B6A.36 GO:0006367 biological_process transcription initiation from RNA polymerase II promoter
Y39B6A.36 GO:0005674 cellular_component transcription factor TFIIF complex
Y39B6A.36 GO:0003677 molecular_function DNA binding
Y39B6A.36 GO:0005524 molecular_function ATP binding
Y39B6A.36 GO:0008026 molecular_function ATP-dependent helicase activity

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7029 Acyrthosiphon pisum 100167421 6087 Hydra magnipapillata 100201891
30195 Bombus terrestris 100647152 8128 Oreochromis niloticus 100699655
143995 Megachile rotundata 100878930 34638 Metaseiulus occidentalis 100904686
9555 Papio anubis 101004183 43179 Ictidomys tridecemlineatus 101957408
9796 Equus caballus 100050971 7425 Nasonia vitripennis 100119177
9986 Oryctolagus cuniculus 100339233 9601 Pongo abelii 100447986
9646 Ailuropoda melanoleuca 100480731 400682 Amphimedon queenslandica 100640735
9785 Loxodonta africana 100664948 10141 Cavia porcellus 100715926
132113 Bombus impatiens 100740836 10029 Cricetulus griseus 100768332
7463 Apis florea 100864480 30611 Otolemur garnettii 100941136
9597 Pan paniscus 100986478 39432 Saimiri boliviensis 101045078
9685 Felis catus 101083822 9595 Gorilla gorilla 101144785
9669 Mustela putorius furo 101674619 9615 Canis familiaris 102152240
7460 Apis mellifera 551470 9598 Pan troglodytes 741868
10116 Rattus norvegicus 81674 28377 Anolis carolinensis ENSACAG00000028333
9358 Choloepus hoffmanni ENSCHOG00000007391 7955 Danio rerio ENSDARG00000006816
9371 Echinops telfairi ENSETEG00000000072 69293 Gasterosteus aculeatus ENSGACG00000006880
9031 Gallus gallus ENSGALG00000016974 9103 Meleagris gallopavo ENSMGAG00000014989
59463 Myotis lucifugus ENSMLUG00000010505 9544 Macaca mulatta ENSMMUG00000012634
9978 Ochotona princeps ENSOPRG00000005640 9813 Procavia capensis ENSPCAG00000005868
59729 Taeniopygia guttata ENSTGUG00000012334 99883 Tetraodon nigroviridis ENSTNIG00000004440
31033 Takifugu rubripes ENSTRUG00000018005 9478 Tarsius syrichta ENSTSYG00000001691
9739 Tursiops truncatus ENSTTRG00000002729 30538 Vicugna pacos ENSVPAG00000008468
8083 Xiphophorus maculatus ENSXMAG00000003551 7227 Drosophila melanogaster 41290
7070 Tribolium castaneum 656515 9365 Erinaceus europaeus ENSEEUG00000011085
8049 Gadus morhua ENSGMOG00000018015 13616 Monodelphis domestica ENSMODG00000025484
8090 Oryzias latipes ENSORLG00000015486 132908 Pteropus vampyrus ENSPVAG00000014092