Basic Information
Gene ID 183847
Gene Name che-1; C55B7.12
Full Name Transcription factor che-1
Organism Caenorhabditis elegans [6239]

Cross Reference
UniProt Q966L8 UniGene Cel.23650
PDB NULL OMIM NULL
KEGG cel:CELE_C55B7.12 UCSC C55B7.12b

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
C55B7.12b Gene3D G3DSA:3.30.160.60 IPR013087 164 187 7.30e-17 Zinc finger C2H2-type/integrase DNA-binding domain
C55B7.12b Gene3D G3DSA:3.30.160.60 IPR013087 188 213 4.10e-18 Zinc finger C2H2-type/integrase DNA-binding domain
C55B7.12b Gene3D G3DSA:3.30.160.60 IPR013087 214 241 3.40e-17 Zinc finger C2H2-type/integrase DNA-binding domain
C55B7.12b Gene3D G3DSA:3.30.160.60 IPR013087 242 272 1.40e-13 Zinc finger C2H2-type/integrase DNA-binding domain
C55B7.12b ProSitePatterns PS00028 IPR007087 168 188 - Zinc finger, C2H2
C55B7.12b ProSitePatterns PS00028 IPR007087 196 216 - Zinc finger, C2H2
C55B7.12b ProSitePatterns PS00028 IPR007087 224 244 - Zinc finger, C2H2
C55B7.12b ProSitePatterns PS00028 IPR007087 252 272 - Zinc finger, C2H2
C55B7.12b ProSiteProfiles PS50157 IPR007087 166 193 0.00e-00 Zinc finger, C2H2
C55B7.12b ProSiteProfiles PS50157 IPR007087 194 221 0.00e-00 Zinc finger, C2H2
C55B7.12b ProSiteProfiles PS50157 IPR007087 222 249 0.00e-00 Zinc finger, C2H2
C55B7.12b ProSiteProfiles PS50157 IPR007087 250 273 0.00e-00 Zinc finger, C2H2
C55B7.12b SMART SM00355 IPR015880 166 188 3.70e-06 Zinc finger, C2H2-like
C55B7.12b SMART SM00355 IPR015880 194 216 5.00e-06 Zinc finger, C2H2-like
C55B7.12b SMART SM00355 IPR015880 222 244 6.70e-06 Zinc finger, C2H2-like
C55B7.12b SMART SM00355 IPR015880 250 272 5.10e-06 Zinc finger, C2H2-like

Pfam Annotation
Protein Pfam ID E.value Name Description
C55B7.12b PF13465 9.2e-26 zf-H2C2_2 Zinc-finger double domain
C55B7.12b PF00096 3.6e-24 zf-C2H2 Zinc finger, C2H2 type
C55B7.12b PF13894 6.2e-15 zf-C2H2_4 C2H2-type zinc finger
C55B7.12b PF12171 2.8e-11 zf-C2H2_jaz Zinc-finger double-stranded RNA-binding
C55B7.12b PF13912 4.6e-11 zf-C2H2_6 C2H2-type zinc finger
C55B7.12b PF05605 4.5e-06 zf-Di19 Drought induced 19 protein (Di19), zinc-binding
C55B7.12b PF12874 0.00011 zf-met Zinc-finger of C2H2 type
C55B7.12b PF09237 0.00017 GAGA GAGA factor

Gene Ontology Annotation
Protein Entry Name Space Description
C55B7.12b GO:0006351 biological_process transcription, DNA-templated
C55B7.12b GO:0006355 biological_process regulation of transcription, DNA-templated
C55B7.12b GO:0005634 cellular_component nucleus
C55B7.12b GO:0003677 molecular_function DNA binding
C55B7.12b GO:0046872 molecular_function metal ion binding