Basic Information | |||
Gene ID | 185022 | ||
Gene Name | pax-3; CELE_F27E5.2, F27E5.2 | ||
Full Name | Protein PAX-3 | ||
Organism | Caenorhabditis elegans [6239] |
Cross Reference | |||
UniProt | G5ED66 | UniGene | Cel.15301 |
PDB | NULL | OMIM | NULL |
KEGG | cel:CELE_F27E5.2 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | G5ED66 |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
F27E5.2 | Gene3D | G3DSA:1.10.10.10 | IPR011991 | 16 | 81 | 2.60e-35 | Winged helix-turn-helix DNA-binding domain |
F27E5.2 | Gene3D | G3DSA:1.10.10.10 | IPR011991 | 85 | 140 | 2.50e-13 | Winged helix-turn-helix DNA-binding domain |
F27E5.2 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 169 | 245 | 1.20e-21 | Homeodomain-like |
F27E5.2 | Pfam | PF00046 | IPR001356 | 188 | 244 | 1.50e-19 | Homeobox domain |
F27E5.2 | Pfam | PF00292 | IPR001523 | 13 | 137 | 1.40e-45 | Paired domain |
F27E5.2 | PRINTS | PR00027 | IPR001523 | 17 | 32 | 8.00e-28 | Paired domain |
F27E5.2 | PRINTS | PR00027 | IPR001523 | 35 | 53 | 8.00e-28 | Paired domain |
F27E5.2 | PRINTS | PR00027 | IPR001523 | 55 | 72 | 8.00e-28 | Paired domain |
F27E5.2 | PRINTS | PR00027 | IPR001523 | 73 | 90 | 8.00e-28 | Paired domain |
F27E5.2 | ProSiteProfiles | PS50071 | IPR001356 | 185 | 245 | 0.00e-00 | Homeobox domain |
F27E5.2 | ProSiteProfiles | PS51057 | IPR001523 | 13 | 140 | 0.00e-00 | Paired domain |
F27E5.2 | SMART | SM00351 | IPR001523 | 13 | 138 | 5.30e-77 | Paired domain |
F27E5.2 | SMART | SM00389 | IPR001356 | 187 | 249 | 1.40e-25 | Homeobox domain |
F27E5.2 | SUPERFAMILY | SSF46689 | IPR009057 | 15 | 138 | 0.00e-00 | Homeodomain-like |
F27E5.2 | SUPERFAMILY | SSF46689 | IPR009057 | 180 | 251 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
F27E5.2 | PF00292 | 1.4013e-45 | PAX | 'Paired box' domain |
F27E5.2 | PF00046 | 6.4e-20 | Homeobox | Homeobox domain |
F27E5.2 | PF13551 | 1.2e-07 | HTH_29 | Winged helix-turn helix |
F27E5.2 | PF05920 | 1.3e-07 | Homeobox_KN | Homeobox KN domain |
F27E5.2 | PF13384 | 6.4e-07 | HTH_23 | Homeodomain-like domain |
F27E5.2 | PF13565 | 7.2e-05 | HTH_32 | Homeodomain-like domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
F27E5.2 | GO:0005634 | cellular_component | nucleus |
F27E5.2 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
F27E5.2 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
143995 | Megachile rotundata | 100880900 | 7425 | Nasonia vitripennis | 100114080 |
7029 | Acyrthosiphon pisum | 100163852 | 9986 | Oryctolagus cuniculus | 100357318 |
28377 | Anolis carolinensis | 100560571 | 30195 | Bombus terrestris | 100650218 |
8128 | Oreochromis niloticus | 100696675 | 132113 | Bombus impatiens | 100746231 |
7463 | Apis florea | 100868259 | 34638 | Metaseiulus occidentalis | 100902716 |
9597 | Pan paniscus | 100975447 | 9555 | Papio anubis | 101016355 |
39432 | Saimiri boliviensis | 101042763 | 9669 | Mustela putorius furo | 101693051 |
43179 | Ictidomys tridecemlineatus | 101976642 | 13735 | Pelodiscus sinensis | 102448040 |
10090 | Mus musculus | 18509 | 7227 | Drosophila melanogaster | 38005 |
10116 | Rattus norvegicus | 500574 | 9606 | Homo sapiens | 5077 |
9913 | Bos taurus | 540951 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000007444 |
9615 | Canis familiaris | ENSCAFG00000016041 | 7719 | Ciona intestinalis | ENSCING00000005904 |
9483 | Callithrix jacchus | ENSCJAG00000012088 | 10141 | Cavia porcellus | ENSCPOG00000006276 |
51511 | Ciona savignyi | ENSCSAVG00000004794 | 7955 | Danio rerio | ENSDARG00000028348 |
9361 | Dasypus novemcinctus | ENSDNOG00000001871 | 9365 | Erinaceus europaeus | ENSEEUG00000012346 |
9371 | Echinops telfairi | ENSETEG00000006800 | 9685 | Felis catus | ENSFCAG00000018967 |
69293 | Gasterosteus aculeatus | ENSGACG00000014017 | 9031 | Gallus gallus | ENSGALG00000005246 |
9595 | Gorilla gorilla | ENSGGOG00000015636 | 9785 | Loxodonta africana | ENSLAFG00000008041 |
9315 | Macropus eugenii | ENSMEUG00000013628 | 30608 | Microcebus murinus | ENSMICG00000000336 |
9544 | Macaca mulatta | ENSMMUG00000017444 | 61853 | Nomascus leucogenys | ENSNLEG00000009611 |
9258 | Ornithorhynchus anatinus | ENSOANG00000007096 | 30611 | Otolemur garnettii | ENSOGAG00000001304 |
9978 | Ochotona princeps | ENSOPRG00000007352 | 8090 | Oryzias latipes | ENSORLG00000004269 |
9813 | Procavia capensis | ENSPCAG00000000403 | 9598 | Pan troglodytes | ENSPTRG00000012969 |
9305 | Sarcophilus harrisii | ENSSHAG00000016542 | 9823 | Sus scrofa | ENSSSCG00000028418 |
59729 | Taeniopygia guttata | ENSTGUG00000007761 | 9739 | Tursiops truncatus | ENSTTRG00000004465 |
30538 | Vicugna pacos | ENSVPAG00000012251 | 8364 | Xenopus tropicalis | ENSXETG00000018527 |
7070 | Tribolium castaneum | 655066 | 9796 | Equus caballus | ENSECAG00000020207 |
8049 | Gadus morhua | ENSGMOG00000006159 | 7897 | Latimeria chalumnae | ENSLACG00000006342 |
9103 | Meleagris gallopavo | ENSMGAG00000005870 | 59463 | Myotis lucifugus | ENSMLUG00000014155 |
37347 | Tupaia belangeri | ENSTBEG00000010268 | 99883 | Tetraodon nigroviridis | ENSTNIG00000014313 |
31033 | Takifugu rubripes | ENSTRUG00000015245 | 8083 | Xiphophorus maculatus | ENSXMAG00000015270 |