Basic Information
Gene ID 190264
Gene Name nhr-239; CELE_Y54F10AM.1, Y54F10AM.1
Full Name Protein NHR-239
Organism Caenorhabditis elegans [6239]

Cross Reference
UniProt Q9BKZ8 UniGene Cel.30732
PDB NULL OMIM NULL
KEGG cel:CELE_Y54F10AM.1 UCSC Y54F10AM.1

Protein Interactions
DIP NULL
IntAct Q9BKZ8
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
Y54F10AM.1 Gene3D G3DSA:1.10.565.10 IPR008946 75 117 4.50e-09 Nuclear hormone receptor, ligand-binding
Y54F10AM.1 Gene3D G3DSA:3.30.50.10 IPR013088 9 74 1.40e-28 Zinc finger, NHR/GATA-type
Y54F10AM.1 Pfam PF00105 IPR001628 10 78 1.50e-22 Zinc finger, nuclear hormone receptor-type
Y54F10AM.1 PRINTS PR00047 IPR001628 11 27 2.30e-13 Zinc finger, nuclear hormone receptor-type
Y54F10AM.1 PRINTS PR00047 IPR001628 27 42 2.30e-13 Zinc finger, nuclear hormone receptor-type
Y54F10AM.1 PRINTS PR00047 IPR001628 61 69 2.30e-13 Zinc finger, nuclear hormone receptor-type
Y54F10AM.1 PRINTS PR00047 IPR001628 69 77 2.30e-13 Zinc finger, nuclear hormone receptor-type
Y54F10AM.1 ProSitePatterns PS00031 IPR001628 11 37 - Zinc finger, nuclear hormone receptor-type
Y54F10AM.1 ProSiteProfiles PS51030 IPR001628 8 84 0.00e-00 Zinc finger, nuclear hormone receptor-type
Y54F10AM.1 SMART SM00399 IPR001628 8 80 2.50e-26 Zinc finger, nuclear hormone receptor-type

Pfam Annotation
Protein Pfam ID E.value Name Description
Y54F10AM.1 PF00105 7.8e-23 zf-C4 Zinc finger, C4 type (two domains)

Gene Ontology Annotation
Protein Entry Name Space Description
Y54F10AM.1 GO:0006351 biological_process transcription, DNA-templated
Y54F10AM.1 GO:0005634 cellular_component nucleus
Y54F10AM.1 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
Y54F10AM.1 GO:0003707 molecular_function steroid hormone receptor activity
Y54F10AM.1 GO:0008270 molecular_function zinc ion binding
Y54F10AM.1 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
10224 Saccoglossus kowalevskii 100377802 30195 Bombus terrestris 100650209
7425 Nasonia vitripennis 100123899 7668 Strongylocentrotus purpuratus 590867
7227 Drosophila melanogaster 40783