Basic Information
Gene ID 190865
Gene Name nhr-41; CELE_Y104H12A.1, Y104H12A.1
Full Name Protein NHR-41, isoform a
Organism Caenorhabditis elegans [6239]

Cross Reference
UniProt Q3V5L2 UniGene Cel.11730
PDB NULL OMIM NULL
KEGG cel:CELE_Y104H12A.1 UCSC Y104H12A.1

Protein Interactions
DIP NULL
IntAct Q3V5L2
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
Y104H12A.1 Gene3D G3DSA:1.10.565.10 IPR008946 257 297 1.50e-30 Nuclear hormone receptor, ligand-binding
Y104H12A.1 Gene3D G3DSA:1.10.565.10 IPR008946 351 352 1.50e-30 Nuclear hormone receptor, ligand-binding
Y104H12A.1 Gene3D G3DSA:1.10.565.10 IPR008946 389 548 1.50e-30 Nuclear hormone receptor, ligand-binding
Y104H12A.1 Gene3D G3DSA:1.10.565.10 IPR008946 581 625 1.50e-30 Nuclear hormone receptor, ligand-binding
Y104H12A.1 Gene3D G3DSA:3.30.50.10 IPR013088 192 256 2.60e-30 Zinc finger, NHR/GATA-type
Y104H12A.1 Pfam PF00104 IPR000536 377 609 2.40e-53 Nuclear hormone receptor, ligand-binding, core
Y104H12A.1 Pfam PF00105 IPR001628 193 260 1.30e-30 Zinc finger, nuclear hormone receptor-type
Y104H12A.1 PRINTS PR00047 IPR001628 194 210 1.50e-18 Zinc finger, nuclear hormone receptor-type
Y104H12A.1 PRINTS PR00047 IPR001628 210 225 1.50e-18 Zinc finger, nuclear hormone receptor-type
Y104H12A.1 PRINTS PR00047 IPR001628 243 251 1.50e-18 Zinc finger, nuclear hormone receptor-type
Y104H12A.1 PRINTS PR00047 IPR001628 251 259 1.50e-18 Zinc finger, nuclear hormone receptor-type
Y104H12A.1 ProSitePatterns PS00031 IPR001628 194 220 - Zinc finger, nuclear hormone receptor-type
Y104H12A.1 ProSiteProfiles PS51030 IPR001628 191 266 0.00e-00 Zinc finger, nuclear hormone receptor-type
Y104H12A.1 SMART SM00399 IPR001628 191 262 1.90e-40 Zinc finger, nuclear hormone receptor-type
Y104H12A.1 SUPERFAMILY SSF48508 IPR008946 379 546 0.00e-00 Nuclear hormone receptor, ligand-binding
Y104H12A.1 SUPERFAMILY SSF48508 IPR008946 578 617 0.00e-00 Nuclear hormone receptor, ligand-binding

Pfam Annotation
Protein Pfam ID E.value Name Description
Y104H12A.1 PF00104 0 Hormone_recep Ligand-binding domain of nuclear hormone receptor
Y104H12A.1 PF00105 7.1e-31 zf-C4 Zinc finger, C4 type (two domains)

Gene Ontology Annotation
Protein Entry Name Space Description
Y104H12A.1 GO:0006355 biological_process regulation of transcription, DNA-templated
Y104H12A.1 GO:0005634 cellular_component nucleus
Y104H12A.1 GO:0003677 molecular_function DNA binding
Y104H12A.1 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
Y104H12A.1 GO:0003707 molecular_function steroid hormone receptor activity
Y104H12A.1 GO:0008270 molecular_function zinc ion binding
Y104H12A.1 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7029 Acyrthosiphon pisum 100163128 9483 Callithrix jacchus 100392011
8128 Oreochromis niloticus 100693047 30611 Otolemur garnettii 100941314
9597 Pan paniscus 100988751 39432 Saimiri boliviensis 101049259
9669 Mustela putorius furo 101674163 9258 Ornithorhynchus anatinus 100074138
7425 Nasonia vitripennis 100120833 10224 Saccoglossus kowalevskii 100372393
9823 Sus scrofa 100513111 10029 Cricetulus griseus 100766644
34638 Metaseiulus occidentalis 100903959 9555 Papio anubis 101014561
7897 Latimeria chalumnae 102357289 59463 Myotis lucifugus 102427490
10090 Mus musculus 22026 7227 Drosophila melanogaster 40378
9615 Canis familiaris 484641 9913 Bos taurus 505531
28377 Anolis carolinensis ENSACAG00000012771 7719 Ciona intestinalis ENSCING00000001639
51511 Ciona savignyi ENSCSAVG00000008663 9361 Dasypus novemcinctus ENSDNOG00000006388
10020 Dipodomys ordii ENSDORG00000007038 9796 Equus caballus ENSECAG00000003791
9365 Erinaceus europaeus ENSEEUG00000011354 9685 Felis catus ENSFCAG00000003537
69293 Gasterosteus aculeatus ENSGACG00000002941 9595 Gorilla gorilla ENSGGOG00000015479
8049 Gadus morhua ENSGMOG00000017040 9785 Loxodonta africana ENSLAFG00000010224
9544 Macaca mulatta ENSMMUG00000005156 9986 Oryctolagus cuniculus ENSOCUG00000006975
9978 Ochotona princeps ENSOPRG00000009351 132908 Pteropus vampyrus ENSPVAG00000017233
10116 Rattus norvegicus ENSRNOG00000010536 42254 Sorex araneus ENSSARG00000004504
37347 Tupaia belangeri ENSTBEG00000002424 30538 Vicugna pacos ENSVPAG00000008509
7668 Strongylocentrotus purpuratus 373398 7955 Danio rerio 569321
7070 Tribolium castaneum 660024 9646 Ailuropoda melanoleuca ENSAMEG00000004318
9358 Choloepus hoffmanni ENSCHOG00000002709 10141 Cavia porcellus ENSCPOG00000001512
9371 Echinops telfairi ENSETEG00000005089 9103 Meleagris gallopavo ENSMGAG00000010372
30608 Microcebus murinus ENSMICG00000010833 13616 Monodelphis domestica ENSMODG00000007047
61853 Nomascus leucogenys ENSNLEG00000005193 8090 Oryzias latipes ENSORLG00000010877
7757 Petromyzon marinus ENSPMAG00000006138 9601 Pongo abelii ENSPPYG00000013408
9598 Pan troglodytes ENSPTRG00000014657 59729 Taeniopygia guttata ENSTGUG00000010590
99883 Tetraodon nigroviridis ENSTNIG00000017919 31033 Takifugu rubripes ENSTRUG00000011580
9478 Tarsius syrichta ENSTSYG00000014206 9739 Tursiops truncatus ENSTTRG00000009876
8364 Xenopus tropicalis ENSXETG00000004817 8083 Xiphophorus maculatus ENSXMAG00000015890