Basic Information
Gene ID 24459 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Hoxc4; Hoxc4_mapped; rCG_50698
Full Name Homeo box C4 (Mapped)
Organism Rattus norvegicus [10116]

Cross Reference
UniProt D3ZK87 UniGene Rn.12051
PDB NULL OMIM NULL
KEGG rno:24459 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000022398 Gene3D G3DSA:1.10.10.60 IPR009057 148 215 7.30e-30 Homeodomain-like
ENSRNOP00000022398 Pfam PF00046 IPR001356 157 213 2.00e-22 Homeobox domain
ENSRNOP00000022398 PRINTS PR00024 IPR020479 178 189 7.10e-09 Homeodomain, metazoa
ENSRNOP00000022398 PRINTS PR00024 IPR020479 193 203 7.10e-09 Homeodomain, metazoa
ENSRNOP00000022398 PRINTS PR00024 IPR020479 203 212 7.10e-09 Homeodomain, metazoa
ENSRNOP00000022398 PRINTS PR00025 IPR017995 134 141 1.00e-05 Homeobox protein, antennapedia type
ENSRNOP00000022398 PRINTS PR00025 IPR017995 157 172 1.00e-05 Homeobox protein, antennapedia type
ENSRNOP00000022398 ProSitePatterns PS00027 IPR017970 189 212 - Homeobox, conserved site
ENSRNOP00000022398 ProSitePatterns PS00032 IPR001827 135 140 - Homeobox protein, antennapedia type, conserved site
ENSRNOP00000022398 ProSiteProfiles PS50071 IPR001356 154 214 0.00e-00 Homeobox domain
ENSRNOP00000022398 SMART SM00389 IPR001356 156 218 7.50e-29 Homeobox domain
ENSRNOP00000022398 SUPERFAMILY SSF46689 IPR009057 144 214 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000022398 PF00046 1e-22 Homeobox Homeobox domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSRNOP00000022398 GO:0006351 biological_process transcription, DNA-templated
ENSRNOP00000022398 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSRNOP00000022398 GO:0007275 biological_process multicellular organismal development
ENSRNOP00000022398 GO:0005634 cellular_component nucleus
ENSRNOP00000022398 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSRNOP00000022398 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
8090 Oryzias latipes 100125418 9823 Sus scrofa 100154759
9544 Macaca mulatta 100430434 8128 Oreochromis niloticus 100534471
10029 Cricetulus griseus 100750374 9597 Pan paniscus 100978122
9555 Papio anubis 101024833 39432 Saimiri boliviensis 101037538
9595 Gorilla gorilla 101130200 9669 Mustela putorius furo 101670518
43179 Ictidomys tridecemlineatus 101963133 8083 Xiphophorus maculatus 102216613
59463 Myotis lucifugus 102432651 13735 Pelodiscus sinensis 102445588
7955 Danio rerio 30345 9606 Homo sapiens 3221
9615 Canis familiaris 486498 9598 Pan troglodytes 749218
28377 Anolis carolinensis ENSACAG00000006499 9646 Ailuropoda melanoleuca ENSAMEG00000004953
9913 Bos taurus ENSBTAG00000039599 9483 Callithrix jacchus ENSCJAG00000007480
10141 Cavia porcellus ENSCPOG00000020196 9796 Equus caballus ENSECAG00000004202
9371 Echinops telfairi ENSETEG00000017258 69293 Gasterosteus aculeatus ENSGACG00000009421
8049 Gadus morhua ENSGMOG00000017915 7897 Latimeria chalumnae ENSLACG00000016556
9315 Macropus eugenii ENSMEUG00000007414 30608 Microcebus murinus ENSMICG00000011729
9258 Ornithorhynchus anatinus ENSOANG00000005767 9986 Oryctolagus cuniculus ENSOCUG00000015516
9978 Ochotona princeps ENSOPRG00000006099 9813 Procavia capensis ENSPCAG00000011039
132908 Pteropus vampyrus ENSPVAG00000014722 99883 Tetraodon nigroviridis ENSTNIG00000001759
31033 Takifugu rubripes ENSTRUG00000003444 9739 Tursiops truncatus ENSTTRG00000004529
8364 Xenopus tropicalis ENSXETG00000023484 51511 Ciona savignyi ENSCSAVG00000001991