Basic Information | |||
Gene ID | 266734 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Npas4; Nxf | ||
Full Name | Neuronal PAS domain-containing protein 4 | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | Q8CJH6 | UniGene | Rn.86654 |
PDB | NULL | OMIM | NULL |
KEGG | rno:266734 | UCSC | RGD:628866 |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 10116.ENSRNOP00000027119 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000027119 | Pfam | PF08447 | IPR013655 | 231 | 299 | 2.40e-11 | PAS fold-3 |
ENSRNOP00000027119 | ProSiteProfiles | PS50112 | IPR000014 | 229 | 275 | 0.00e-00 | PAS domain |
ENSRNOP00000027119 | ProSiteProfiles | PS50112 | IPR000014 | 70 | 144 | 0.00e-00 | PAS domain |
ENSRNOP00000027119 | ProSiteProfiles | PS50888 | IPR011598 | 1 | 53 | 0.00e-00 | Myc-type, basic helix-loop-helix (bHLH) domain |
ENSRNOP00000027119 | SMART | SM00091 | IPR000014 | 213 | 273 | 4.20e-03 | PAS domain |
ENSRNOP00000027119 | SMART | SM00091 | IPR000014 | 72 | 140 | 7.50e-09 | PAS domain |
ENSRNOP00000027119 | SUPERFAMILY | SSF55785 | IPR000014 | 220 | 301 | 0.00e-00 | PAS domain |
ENSRNOP00000027119 | SUPERFAMILY | SSF55785 | IPR000014 | 81 | 151 | 0.00e-00 | PAS domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000027119 | PF08447 | 6.1e-16 | PAS_3 | PAS fold |
ENSRNOP00000027119 | PF14598 | 4.2e-10 | PAS_11 | PAS domain |
ENSRNOP00000027119 | PF13426 | 1.3e-06 | PAS_9 | PAS domain |
ENSRNOP00000027119 | PF00989 | 0.00014 | PAS | PAS fold |
ENSRNOP00000027119 | PF00010 | 0.00054 | HLH | Helix-loop-helix DNA-binding domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000027119 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSRNOP00000027119 | GO:0005634 | cellular_component | nucleus |
ENSRNOP00000027119 | GO:0003677 | molecular_function | DNA binding |
ENSRNOP00000027119 | GO:0004871 | molecular_function | signal transducer activity |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7029 | Acyrthosiphon pisum | 100164079 | 9986 | Oryctolagus cuniculus | 100359105 |
9601 | Pongo abelii | 100442686 | 61853 | Nomascus leucogenys | 100593820 |
9785 | Loxodonta africana | 100654633 | 10141 | Cavia porcellus | 100715310 |
10029 | Cricetulus griseus | 100761679 | 30611 | Otolemur garnettii | 100950856 |
9597 | Pan paniscus | 100970638 | 9555 | Papio anubis | 100998221 |
39432 | Saimiri boliviensis | 101054431 | 9595 | Gorilla gorilla | 101145744 |
9669 | Mustela putorius furo | 101675117 | 43179 | Ictidomys tridecemlineatus | 101955804 |
8083 | Xiphophorus maculatus | 102228877 | 7897 | Latimeria chalumnae | 102359453 |
59463 | Myotis lucifugus | 102436098 | 10090 | Mus musculus | 225872 |
9606 | Homo sapiens | 266743 | 7227 | Drosophila melanogaster | 43174 |
9598 | Pan troglodytes | 466676 | 9544 | Macaca mulatta | 714161 |
9913 | Bos taurus | ENSBTAG00000014925 | 7955 | Danio rerio | ENSDARG00000061920 |
9365 | Erinaceus europaeus | ENSEEUG00000004685 | 9371 | Echinops telfairi | ENSETEG00000003654 |
9685 | Felis catus | ENSFCAG00000009299 | 69293 | Gasterosteus aculeatus | ENSGACG00000017076 |
8049 | Gadus morhua | ENSGMOG00000003455 | 9315 | Macropus eugenii | ENSMEUG00000004384 |
9103 | Meleagris gallopavo | ENSMGAG00000003727 | 30608 | Microcebus murinus | ENSMICG00000003754 |
13616 | Monodelphis domestica | ENSMODG00000008299 | 8090 | Oryzias latipes | ENSORLG00000001999 |
13735 | Pelodiscus sinensis | ENSPSIG00000002322 | 132908 | Pteropus vampyrus | ENSPVAG00000001233 |
42254 | Sorex araneus | ENSSARG00000003603 | 9305 | Sarcophilus harrisii | ENSSHAG00000009488 |
9823 | Sus scrofa | ENSSSCG00000012942 | 99883 | Tetraodon nigroviridis | ENSTNIG00000016823 |
31033 | Takifugu rubripes | ENSTRUG00000011857 | 9478 | Tarsius syrichta | ENSTSYG00000001991 |
9739 | Tursiops truncatus | ENSTTRG00000001951 |