Basic Information | |||
Gene ID | 29227 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Nfib; NF1-B; rCG_55296 | ||
Full Name | Nuclear factor 1 | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | O70185 | UniGene | Rn.219275 |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000060839 | PANTHER | PTHR11492 | IPR000647 | 1 | 561 | 0.00e-00 | CTF transcription factor/nuclear factor 1 |
ENSRNOP00000060839 | Pfam | PF00859 | IPR000647 | 209 | 489 | 9.20e-116 | CTF transcription factor/nuclear factor 1 |
ENSRNOP00000060839 | Pfam | PF03165 | IPR003619 | 70 | 171 | 1.40e-11 | MAD homology 1, Dwarfin-type |
ENSRNOP00000060839 | Pfam | PF10524 | IPR019548 | 5 | 47 | 2.80e-27 | CTF transcription factor/nuclear factor 1, N-terminal |
ENSRNOP00000060839 | ProSitePatterns | PS00349 | IPR019739 | 37 | 48 | - | CTF transcription factor/nuclear factor 1, conserved site |
ENSRNOP00000060839 | ProSiteProfiles | PS51080 | IPR020604 | 2 | 195 | 0.00e-00 | CTF transcription factor/nuclear factor 1, DNA-binding domain |
ENSRNOP00000060839 | SMART | SM00523 | IPR003619 | 68 | 176 | 3.50e-22 | MAD homology 1, Dwarfin-type |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000060839 | PF00859 | 0 | CTF_NFI | CTF/NF-I family transcription modulation region |
ENSRNOP00000060839 | PF10524 | 1.6e-27 | NfI_DNAbd_pre-N | Nuclear factor I protein pre-N-terminus |
ENSRNOP00000060839 | PF03165 | 7.6e-12 | MH1 | MH1 domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000060839 | GO:0006260 | biological_process | DNA replication |
ENSRNOP00000060839 | GO:0006366 | biological_process | transcription from RNA polymerase II promoter |
ENSRNOP00000060839 | GO:0045944 | biological_process | positive regulation of transcription from RNA polymerase II promoter |
ENSRNOP00000060839 | GO:0005634 | cellular_component | nucleus |
ENSRNOP00000060839 | GO:0003677 | molecular_function | DNA binding |
ENSRNOP00000060839 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7425 | Nasonia vitripennis | 100118989 | 9823 | Sus scrofa | 100155995 |
7029 | Acyrthosiphon pisum | 100169415 | 6087 | Hydra magnipapillata | 100211197 |
9483 | Callithrix jacchus | 100397451 | 9646 | Ailuropoda melanoleuca | 100477452 |
400682 | Amphimedon queenslandica | 100636562 | 30195 | Bombus terrestris | 100645803 |
132113 | Bombus impatiens | 100746344 | 10029 | Cricetulus griseus | 100761735 |
7463 | Apis florea | 100869940 | 143995 | Megachile rotundata | 100883560 |
7668 | Strongylocentrotus purpuratus | 100893750 | 34638 | Metaseiulus occidentalis | 100908516 |
30611 | Otolemur garnettii | 100966199 | 9597 | Pan paniscus | 100983453 |
9555 | Papio anubis | 101014357 | 39432 | Saimiri boliviensis | 101047681 |
9595 | Gorilla gorilla | 101141786 | 9669 | Mustela putorius furo | 101671584 |
7897 | Latimeria chalumnae | 102365155 | 59463 | Myotis lucifugus | 102423785 |
13735 | Pelodiscus sinensis | 102448068 | 10090 | Mus musculus | 18028 |
7227 | Drosophila melanogaster | 43782 | 9615 | Canis familiaris | 474709 |
9606 | Homo sapiens | 4781 | 7070 | Tribolium castaneum | 660261 |
9544 | Macaca mulatta | 714098 | 28377 | Anolis carolinensis | ENSACAG00000017798 |
9913 | Bos taurus | ENSBTAG00000027442 | 7719 | Ciona intestinalis | ENSCING00000002528 |
10141 | Cavia porcellus | ENSCPOG00000003925 | 51511 | Ciona savignyi | ENSCSAVG00000011360 |
9361 | Dasypus novemcinctus | ENSDNOG00000019957 | 10020 | Dipodomys ordii | ENSDORG00000004277 |
9796 | Equus caballus | ENSECAG00000024578 | 9365 | Erinaceus europaeus | ENSEEUG00000012997 |
9371 | Echinops telfairi | ENSETEG00000016780 | 9685 | Felis catus | ENSFCAG00000008473 |
69293 | Gasterosteus aculeatus | ENSGACG00000019677 | 9031 | Gallus gallus | ENSGALG00000005441 |
8049 | Gadus morhua | ENSGMOG00000005260 | 9785 | Loxodonta africana | ENSLAFG00000000868 |
9315 | Macropus eugenii | ENSMEUG00000010629 | 9103 | Meleagris gallopavo | ENSMGAG00000007634 |
30608 | Microcebus murinus | ENSMICG00000005833 | 13616 | Monodelphis domestica | ENSMODG00000014999 |
61853 | Nomascus leucogenys | ENSNLEG00000017626 | 9258 | Ornithorhynchus anatinus | ENSOANG00000030883 |
9986 | Oryctolagus cuniculus | ENSOCUG00000004249 | 8128 | Oreochromis niloticus | ENSONIG00000013455 |
9978 | Ochotona princeps | ENSOPRG00000000687 | 8090 | Oryzias latipes | ENSORLG00000005185 |
9813 | Procavia capensis | ENSPCAG00000002420 | 7757 | Petromyzon marinus | ENSPMAG00000009308 |
9601 | Pongo abelii | ENSPPYG00000019214 | 9598 | Pan troglodytes | ENSPTRG00000010261 |
132908 | Pteropus vampyrus | ENSPVAG00000007629 | 42254 | Sorex araneus | ENSSARG00000002265 |
9305 | Sarcophilus harrisii | ENSSHAG00000015798 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000002234 |
37347 | Tupaia belangeri | ENSTBEG00000001947 | 59729 | Taeniopygia guttata | ENSTGUG00000004639 |
99883 | Tetraodon nigroviridis | ENSTNIG00000011170 | 31033 | Takifugu rubripes | ENSTRUG00000013602 |
9478 | Tarsius syrichta | ENSTSYG00000008733 | 9739 | Tursiops truncatus | ENSTTRG00000010572 |
30538 | Vicugna pacos | ENSVPAG00000005804 | 8364 | Xenopus tropicalis | ENSXETG00000000835 |
8083 | Xiphophorus maculatus | ENSXMAG00000008538 | 9358 | Choloepus hoffmanni | ENSCHOG00000002015 |