Basic Information
Gene ID 297867 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Arid1a; Arid1a_predicted; rCG_30872
Full Name AT rich interactive domain 1A (Swi1 like) (Predicted)
Organism Rattus norvegicus [10116]

Cross Reference
UniProt D4A3E3 UniGene Rn.61077
PDB NULL OMIM NULL
KEGG rno:297867 UCSC RGD:1310500

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000009173 Gene3D G3DSA:1.10.150.60 IPR001606 618 740 1.70e-43 ARID/BRIGHT DNA-binding domain
ENSRNOP00000009173 Pfam PF01388 IPR001606 635 722 2.60e-24 ARID/BRIGHT DNA-binding domain
ENSRNOP00000009173 Pfam PF12031 IPR021906 1601 1857 5.70e-143 Protein of unknown function DUF3518
ENSRNOP00000009173 ProSiteProfiles PS51011 IPR001606 635 726 0.00e-00 ARID/BRIGHT DNA-binding domain
ENSRNOP00000009173 SMART SM00501 IPR001606 636 727 1.50e-33 ARID/BRIGHT DNA-binding domain
ENSRNOP00000009173 SUPERFAMILY SSF46774 IPR001606 620 734 0.00e-00 ARID/BRIGHT DNA-binding domain
ENSRNOP00000009173 SUPERFAMILY SSF48371 IPR016024 1741 1874 0.00e-00 Armadillo-type fold

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000009173 PF12031 0 DUF3518 Domain of unknown function (DUF3518)
ENSRNOP00000009173 PF01388 2.2e-24 ARID ARID/BRIGHT DNA binding domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSRNOP00000009173 GO:0006351 biological_process transcription, DNA-templated
ENSRNOP00000009173 GO:0005634 cellular_component nucleus
ENSRNOP00000009173 GO:0003677 molecular_function DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7029 Acyrthosiphon pisum 100165557 143995 Megachile rotundata 100883763
9597 Pan paniscus 100988406 7070 Tribolium castaneum 100141527
13735 Pelodiscus sinensis 102444041 10090 Mus musculus 93760
28377 Anolis carolinensis ENSACAG00000016601 9913 Bos taurus ENSBTAG00000001024
7719 Ciona intestinalis ENSCING00000014057 9031 Gallus gallus ENSGALG00000000360
8049 Gadus morhua ENSGMOG00000018896 7897 Latimeria chalumnae ENSLACG00000008843
9669 Mustela putorius furo ENSMPUG00000015675 8128 Oreochromis niloticus ENSONIG00000007618
8090 Oryzias latipes ENSORLG00000004410 9813 Procavia capensis ENSPCAG00000012284
43179 Ictidomys tridecemlineatus ENSSTOG00000022501 59729 Taeniopygia guttata ENSTGUG00000000997
99883 Tetraodon nigroviridis ENSTNIG00000004670 9478 Tarsius syrichta ENSTSYG00000007538
8364 Xenopus tropicalis ENSXETG00000020695 9606 Homo sapiens 8289
9646 Ailuropoda melanoleuca ENSAMEG00000010750 9615 Canis familiaris ENSCAFG00000012314
9483 Callithrix jacchus ENSCJAG00000009833 10141 Cavia porcellus ENSCPOG00000010387
10020 Dipodomys ordii ENSDORG00000002442 9796 Equus caballus ENSECAG00000017991
9365 Erinaceus europaeus ENSEEUG00000008405 9371 Echinops telfairi ENSETEG00000018145
9685 Felis catus ENSFCAG00000012814 69293 Gasterosteus aculeatus ENSGACG00000007244
9595 Gorilla gorilla ENSGGOG00000004967 9785 Loxodonta africana ENSLAFG00000017591
9103 Meleagris gallopavo ENSMGAG00000009537 59463 Myotis lucifugus ENSMLUG00000002492
9544 Macaca mulatta ENSMMUG00000012697 13616 Monodelphis domestica ENSMODG00000014380
61853 Nomascus leucogenys ENSNLEG00000009343 9986 Oryctolagus cuniculus ENSOCUG00000005314
9978 Ochotona princeps ENSOPRG00000016369 7757 Petromyzon marinus ENSPMAG00000004843
9601 Pongo abelii ENSPPYG00000001680 132908 Pteropus vampyrus ENSPVAG00000017274
42254 Sorex araneus ENSSARG00000013452 9305 Sarcophilus harrisii ENSSHAG00000013363
37347 Tupaia belangeri ENSTBEG00000010118 31033 Takifugu rubripes ENSTRUG00000012325
9739 Tursiops truncatus ENSTTRG00000016408 30538 Vicugna pacos ENSVPAG00000008077
8083 Xiphophorus maculatus ENSXMAG00000012041