Basic Information | |||
Gene ID | 299766 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Myf5; Myf5_predicted; rCG_48648 | ||
Full Name | Myogenic factor 5 (Predicted) | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | D3ZVU3 | UniGene | Rn.218675 |
PDB | NULL | OMIM | NULL |
KEGG | rno:299766 | UCSC | RGD:1308322 |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000006453 | Gene3D | G3DSA:4.10.280.10 | IPR011598 | 74 | 139 | 3.60e-30 | Myc-type, basic helix-loop-helix (bHLH) domain |
ENSRNOP00000006453 | Pfam | PF00010 | IPR011598 | 84 | 135 | 2.40e-15 | Myc-type, basic helix-loop-helix (bHLH) domain |
ENSRNOP00000006453 | Pfam | PF01586 | IPR002546 | 1 | 83 | 2.50e-30 | Myogenic basic muscle-specific protein |
ENSRNOP00000006453 | Pfam | PF12232 | IPR022032 | 143 | 214 | 2.80e-26 | Myogenic determination factor 5 |
ENSRNOP00000006453 | ProSiteProfiles | PS50888 | IPR011598 | 83 | 134 | 0.00e-00 | Myc-type, basic helix-loop-helix (bHLH) domain |
ENSRNOP00000006453 | SMART | SM00353 | IPR011598 | 89 | 140 | 2.60e-18 | Myc-type, basic helix-loop-helix (bHLH) domain |
ENSRNOP00000006453 | SMART | SM00520 | IPR002546 | 1 | 88 | 1.90e-54 | Myogenic basic muscle-specific protein |
ENSRNOP00000006453 | SUPERFAMILY | SSF47459 | IPR011598 | 83 | 158 | 0.00e-00 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000006453 | PF01586 | 9.9e-31 | Basic | Myogenic Basic domain |
ENSRNOP00000006453 | PF12232 | 2.8e-26 | Myf5 | Myogenic determination factor 5 |
ENSRNOP00000006453 | PF00010 | 1.2e-15 | HLH | Helix-loop-helix DNA-binding domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000006453 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSRNOP00000006453 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSRNOP00000006453 | GO:0007517 | biological_process | muscle organ development |
ENSRNOP00000006453 | GO:0005634 | cellular_component | nucleus |
ENSRNOP00000006453 | GO:0003677 | molecular_function | DNA binding |
ENSRNOP00000006453 | GO:0046983 | molecular_function | protein dimerization activity |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9258 | Ornithorhynchus anatinus | 100073499 | 10029 | Cricetulus griseus | 100773160 |
34638 | Metaseiulus occidentalis | 100904128 | 30611 | Otolemur garnettii | 100954459 |
9555 | Papio anubis | 101026712 | 39432 | Saimiri boliviensis | 101036849 |
43179 | Ictidomys tridecemlineatus | 101976586 | 8128 | Oreochromis niloticus | 102078955 |
59463 | Myotis lucifugus | 102432684 | 10090 | Mus musculus | 17877 |
13616 | Monodelphis domestica | 100013522 | 9796 | Equus caballus | 100060703 |
9986 | Oryctolagus cuniculus | 100351906 | 9601 | Pongo abelii | 100448110 |
9646 | Ailuropoda melanoleuca | 100483494 | 61853 | Nomascus leucogenys | 100605738 |
9785 | Loxodonta africana | 100674686 | 9597 | Pan paniscus | 100979557 |
9669 | Mustela putorius furo | 101681356 | 8083 | Xiphophorus maculatus | 102224658 |
13735 | Pelodiscus sinensis | 102459218 | 9913 | Bos taurus | 281336 |
8364 | Xenopus tropicalis | 394529 | 7070 | Tribolium castaneum | 660723 |
28377 | Anolis carolinensis | ENSACAG00000014431 | 9358 | Choloepus hoffmanni | ENSCHOG00000008319 |
7719 | Ciona intestinalis | ENSCING00000007328 | 9365 | Erinaceus europaeus | ENSEEUG00000011612 |
9031 | Gallus gallus | ENSGALG00000028091 | 30608 | Microcebus murinus | ENSMICG00000011211 |
8090 | Oryzias latipes | ENSORLG00000016257 | 9813 | Procavia capensis | ENSPCAG00000001722 |
37347 | Tupaia belangeri | ENSTBEG00000008363 | 59729 | Taeniopygia guttata | ENSTGUG00000007755 |
99883 | Tetraodon nigroviridis | ENSTNIG00000011406 | 9478 | Tarsius syrichta | ENSTSYG00000003282 |
9739 | Tursiops truncatus | ENSTTRG00000014691 | 7227 | Drosophila melanogaster | 42799 |
9598 | Pan troglodytes | 467081 | 9544 | Macaca mulatta | 697306 |
9483 | Callithrix jacchus | ENSCJAG00000019340 | 51511 | Ciona savignyi | ENSCSAVG00000002947 |
10020 | Dipodomys ordii | ENSDORG00000015437 | 9371 | Echinops telfairi | ENSETEG00000011255 |
9685 | Felis catus | ENSFCAG00000015011 | 9595 | Gorilla gorilla | ENSGGOG00000004366 |
9315 | Macropus eugenii | ENSMEUG00000010628 | 9978 | Ochotona princeps | ENSOPRG00000009007 |
132908 | Pteropus vampyrus | ENSPVAG00000003336 | 42254 | Sorex araneus | ENSSARG00000008217 |
9823 | Sus scrofa | ENSSSCG00000000937 | 31033 | Takifugu rubripes | ENSTRUG00000010781 |
30538 | Vicugna pacos | ENSVPAG00000001927 |