Basic Information
Gene ID 30529
Gene Name sox3; zgc:110279
Full Name Transcription factor Sox-3
Organism Danio rerio [7955]

Cross Reference
UniProt Q6EJB7 UniGene Dr.104569
PDB NULL OMIM NULL
KEGG dre:30529 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
NP_001001811 Gene3D G3DSA:1.10.30.10 IPR009071 34 113 9.00e-41 High mobility group box domain
NP_001001811 Pfam PF00505 IPR009071 35 103 5.70e-27 High mobility group box domain
NP_001001811 Pfam PF12336 IPR022097 104 182 4.20e-31 Transcription factor SOX
NP_001001811 ProSiteProfiles PS50118 IPR009071 35 103 0.00e-00 High mobility group box domain
NP_001001811 SMART SM00398 IPR009071 34 104 5.60e-31 High mobility group box domain
NP_001001811 SUPERFAMILY SSF47095 IPR009071 25 107 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
NP_001001811 PF12336 4.2e-31 SOXp SOX transcription factor
NP_001001811 PF00505 5.7e-27 HMG_box HMG (high mobility group) box
NP_001001811 PF09011 2.7e-11 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
NP_001001811 GO:0000122 biological_process negative regulation of transcription from RNA polymerase II promoter
NP_001001811 GO:0006351 biological_process transcription, DNA-templated
NP_001001811 GO:0006355 biological_process regulation of transcription, DNA-templated
NP_001001811 GO:0005634 cellular_component nucleus
NP_001001811 GO:0003677 molecular_function DNA binding
NP_001001811 GO:0043565 molecular_function sequence-specific DNA binding