Basic Information
Gene ID 30543
Gene Name sox21a; sox21, sox30
Full Name Transcription factor Sox-21-A
Organism Danio rerio [7955]

Cross Reference
UniProt Q7SZS1 UniGene Dr.132865
PDB NULL OMIM NULL
KEGG dre:30543 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
NP_571361 Gene3D G3DSA:1.10.30.10 IPR009071 6 86 3.40e-40 High mobility group box domain
NP_571361 Pfam PF00505 IPR009071 8 76 1.40e-26 High mobility group box domain
NP_571361 ProSiteProfiles PS50118 IPR009071 8 76 0.00e-00 High mobility group box domain
NP_571361 SMART SM00398 IPR009071 7 77 1.20e-31 High mobility group box domain
NP_571361 SUPERFAMILY SSF47095 IPR009071 3 94 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
NP_571361 PF00505 8.4e-27 HMG_box HMG (high mobility group) box
NP_571361 PF09011 4e-10 HMG_box_2 HMG-box domain
NP_571361 PF12336 0.00028 SOXp SOX transcription factor

Gene Ontology Annotation
Protein Entry Name Space Description
NP_571361 GO:0000122 biological_process negative regulation of transcription from RNA polymerase II promoter
NP_571361 GO:0006351 biological_process transcription, DNA-templated
NP_571361 GO:0045892 biological_process negative regulation of transcription, DNA-templated
NP_571361 GO:0005634 cellular_component nucleus
NP_571361 GO:0043565 molecular_function sequence-specific DNA binding