Basic Information | |||
Gene ID | 30543 | ||
Gene Name | sox21a; sox21, sox30 | ||
Full Name | Transcription factor Sox-21-A | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | Q7SZS1 | UniGene | Dr.132865 |
PDB | NULL | OMIM | NULL |
KEGG | dre:30543 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
NP_571361 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 6 | 86 | 3.40e-40 | High mobility group box domain |
NP_571361 | Pfam | PF00505 | IPR009071 | 8 | 76 | 1.40e-26 | High mobility group box domain |
NP_571361 | ProSiteProfiles | PS50118 | IPR009071 | 8 | 76 | 0.00e-00 | High mobility group box domain |
NP_571361 | SMART | SM00398 | IPR009071 | 7 | 77 | 1.20e-31 | High mobility group box domain |
NP_571361 | SUPERFAMILY | SSF47095 | IPR009071 | 3 | 94 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
NP_571361 | PF00505 | 8.4e-27 | HMG_box | HMG (high mobility group) box |
NP_571361 | PF09011 | 4e-10 | HMG_box_2 | HMG-box domain |
NP_571361 | PF12336 | 0.00028 | SOXp | SOX transcription factor |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
NP_571361 | GO:0000122 | biological_process | negative regulation of transcription from RNA polymerase II promoter |
NP_571361 | GO:0006351 | biological_process | transcription, DNA-templated |
NP_571361 | GO:0045892 | biological_process | negative regulation of transcription, DNA-templated |
NP_571361 | GO:0005634 | cellular_component | nucleus |
NP_571361 | GO:0043565 | molecular_function | sequence-specific DNA binding |