Basic Information
Gene ID 305471 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Patz1; Zfp278; rCG_35839
Full Name Protein Patz1
Organism Rattus norvegicus [10116]

Cross Reference
UniProt D3ZX15 UniGene Rn.203833
PDB NULL OMIM NULL
KEGG rno:305471 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000025378 Gene3D G3DSA:3.30.160.60 IPR013087 356 384 9.20e-11 Zinc finger C2H2-type/integrase DNA-binding domain
ENSRNOP00000025378 Gene3D G3DSA:3.30.160.60 IPR013087 385 407 1.60e-13 Zinc finger C2H2-type/integrase DNA-binding domain
ENSRNOP00000025378 Gene3D G3DSA:3.30.160.60 IPR013087 411 435 8.60e-12 Zinc finger C2H2-type/integrase DNA-binding domain
ENSRNOP00000025378 Gene3D G3DSA:3.30.160.60 IPR013087 436 465 4.20e-08 Zinc finger C2H2-type/integrase DNA-binding domain
ENSRNOP00000025378 Gene3D G3DSA:3.30.160.60 IPR013087 555 582 7.50e-07 Zinc finger C2H2-type/integrase DNA-binding domain
ENSRNOP00000025378 Gene3D G3DSA:3.30.710.10 IPR011333 17 158 1.60e-33 BTB/POZ fold
ENSRNOP00000025378 Pfam PF00096 IPR007087 559 582 5.40e-05 Zinc finger, C2H2
ENSRNOP00000025378 Pfam PF00651 IPR013069 30 159 7.90e-26 BTB/POZ
ENSRNOP00000025378 ProSitePatterns PS00028 IPR007087 294 314 - Zinc finger, C2H2
ENSRNOP00000025378 ProSitePatterns PS00028 IPR007087 357 377 - Zinc finger, C2H2
ENSRNOP00000025378 ProSitePatterns PS00028 IPR007087 385 405 - Zinc finger, C2H2
ENSRNOP00000025378 ProSitePatterns PS00028 IPR007087 415 436 - Zinc finger, C2H2
ENSRNOP00000025378 ProSitePatterns PS00028 IPR007087 444 464 - Zinc finger, C2H2
ENSRNOP00000025378 ProSitePatterns PS00028 IPR007087 561 582 - Zinc finger, C2H2
ENSRNOP00000025378 ProSitePatterns PS00354 IPR000637 262 272 - HMG-I/HMG-Y, DNA-binding, conserved site
ENSRNOP00000025378 ProSiteProfiles PS50097 IPR000210 41 130 0.00e-00 BTB/POZ-like
ENSRNOP00000025378 ProSiteProfiles PS50157 IPR007087 292 314 0.00e-00 Zinc finger, C2H2
ENSRNOP00000025378 ProSiteProfiles PS50157 IPR007087 355 382 0.00e-00 Zinc finger, C2H2
ENSRNOP00000025378 ProSiteProfiles PS50157 IPR007087 383 410 0.00e-00 Zinc finger, C2H2
ENSRNOP00000025378 ProSiteProfiles PS50157 IPR007087 413 441 0.00e-00 Zinc finger, C2H2
ENSRNOP00000025378 ProSiteProfiles PS50157 IPR007087 442 469 0.00e-00 Zinc finger, C2H2
ENSRNOP00000025378 ProSiteProfiles PS50157 IPR007087 559 582 0.00e-00 Zinc finger, C2H2
ENSRNOP00000025378 SMART SM00225 IPR000210 41 160 4.10e-26 BTB/POZ-like
ENSRNOP00000025378 SMART SM00355 IPR015880 292 314 4.10e-05 Zinc finger, C2H2-like
ENSRNOP00000025378 SMART SM00355 IPR015880 355 377 2.90e-05 Zinc finger, C2H2-like
ENSRNOP00000025378 SMART SM00355 IPR015880 383 405 1.70e-06 Zinc finger, C2H2-like
ENSRNOP00000025378 SMART SM00355 IPR015880 413 436 1.10e-05 Zinc finger, C2H2-like
ENSRNOP00000025378 SMART SM00355 IPR015880 442 464 4.80e-05 Zinc finger, C2H2-like
ENSRNOP00000025378 SMART SM00355 IPR015880 468 489 6.70e-02 Zinc finger, C2H2-like
ENSRNOP00000025378 SMART SM00355 IPR015880 559 582 6.60e-07 Zinc finger, C2H2-like
ENSRNOP00000025378 SMART SM00384 IPR017956 264 276 8.40e-04 AT hook, DNA-binding motif
ENSRNOP00000025378 SMART SM00384 IPR017956 345 357 1.30e+00 AT hook, DNA-binding motif
ENSRNOP00000025378 SUPERFAMILY SSF54695 IPR011333 13 70 0.00e-00 BTB/POZ fold
ENSRNOP00000025378 SUPERFAMILY SSF54695 IPR011333 98 158 0.00e-00 BTB/POZ fold

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000025378 PF13894 7.7e-30 zf-C2H2_4 C2H2-type zinc finger
ENSRNOP00000025378 PF00651 4.6e-26 BTB BTB/POZ domain
ENSRNOP00000025378 PF00096 1.1e-23 zf-C2H2 Zinc finger, C2H2 type
ENSRNOP00000025378 PF13465 5.3e-17 zf-H2C2_2 Zinc-finger double domain
ENSRNOP00000025378 PF12171 5.5e-09 zf-C2H2_jaz Zinc-finger double-stranded RNA-binding
ENSRNOP00000025378 PF12874 1e-07 zf-met Zinc-finger of C2H2 type
ENSRNOP00000025378 PF05605 0.00052 zf-Di19 Drought induced 19 protein (Di19), zinc-binding

Gene Ontology Annotation
Protein Entry Name Space Description
ENSRNOP00000025378 GO:0006351 biological_process transcription, DNA-templated
ENSRNOP00000025378 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSRNOP00000025378 GO:0005634 cellular_component nucleus
ENSRNOP00000025378 GO:0003677 molecular_function DNA binding
ENSRNOP00000025378 GO:0046872 molecular_function metal ion binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9555 Papio anubis 100137231 9785 Loxodonta africana 100677392
9595 Gorilla gorilla 101128613 43179 Ictidomys tridecemlineatus 101975092
9258 Ornithorhynchus anatinus 100074257 9601 Pongo abelii 100460867
9597 Pan paniscus 100991512 39432 Saimiri boliviensis 101031836
31033 Takifugu rubripes 101076300 9685 Felis catus 101097426
59463 Myotis lucifugus 102437969 9606 Homo sapiens 23598
9031 Gallus gallus 416963 9913 Bos taurus 532416
10090 Mus musculus 56218 9358 Choloepus hoffmanni ENSCHOG00000013336
9483 Callithrix jacchus ENSCJAG00000010978 7955 Danio rerio ENSDARG00000076584
9365 Erinaceus europaeus ENSEEUG00000005457 69293 Gasterosteus aculeatus ENSGACG00000001483
8049 Gadus morhua ENSGMOG00000001062 7897 Latimeria chalumnae ENSLACG00000016839
9315 Macropus eugenii ENSMEUG00000016293 9544 Macaca mulatta ENSMMUG00000013911
61853 Nomascus leucogenys ENSNLEG00000004385 9978 Ochotona princeps ENSOPRG00000002286
9813 Procavia capensis ENSPCAG00000009994 132908 Pteropus vampyrus ENSPVAG00000001749
9823 Sus scrofa ENSSSCG00000010027 59729 Taeniopygia guttata ENSTGUG00000009749
99883 Tetraodon nigroviridis ENSTNIG00000014714 8083 Xiphophorus maculatus ENSXMAG00000015531
9598 Pan troglodytes 470184 9361 Dasypus novemcinctus ENSDNOG00000003183
9796 Equus caballus ENSECAG00000025030 9103 Meleagris gallopavo ENSMGAG00000008439
30608 Microcebus murinus ENSMICG00000005430 13616 Monodelphis domestica ENSMODG00000009674
9669 Mustela putorius furo ENSMPUG00000012814 13735 Pelodiscus sinensis ENSPSIG00000011562
9305 Sarcophilus harrisii ENSSHAG00000012770 9739 Tursiops truncatus ENSTTRG00000010279
8364 Xenopus tropicalis ENSXETG00000004190