Basic Information
Gene ID 305968 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Hmbox1
Full Name Protein Hmbox1
Organism Rattus norvegicus [10116]

Cross Reference
UniProt D3ZER1 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
ENSEMBL
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000017962 Gene3D G3DSA:1.10.10.60 IPR009057 261 344 3.30e-35 Homeodomain-like
ENSRNOP00000017962 Gene3D G3DSA:1.10.260.40 IPR010982 145 238 9.70e-36 Lambda repressor-like, DNA-binding domain
ENSRNOP00000017962 Pfam PF00046 IPR001356 269 339 1.40e-10 Homeobox domain
ENSRNOP00000017962 Pfam PF04814 IPR006899 25 228 1.30e-12 Hepatocyte nuclear factor 1, N-terminal
ENSRNOP00000017962 ProSiteProfiles PS50071 IPR001356 265 340 0.00e-00 Homeobox domain
ENSRNOP00000017962 SMART SM00389 IPR001356 267 344 3.50e-11 Homeobox domain
ENSRNOP00000017962 SUPERFAMILY SSF46689 IPR009057 261 344 0.00e-00 Homeodomain-like
ENSRNOP00000017962 SUPERFAMILY SSF47413 IPR010982 147 237 0.00e-00 Lambda repressor-like, DNA-binding domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000017962 PF04814 1.3e-12 HNF-1_N Hepatocyte nuclear factor 1 (HNF-1), N terminus
ENSRNOP00000017962 PF00046 1.4e-10 Homeobox Homeobox domain
ENSRNOP00000017962 PF05920 6.8e-05 Homeobox_KN Homeobox KN domain
ENSRNOP00000017962 PF13744 0.00058 HTH_37 Helix-turn-helix domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSRNOP00000017962 GO:0006351 biological_process transcription, DNA-templated
ENSRNOP00000017962 GO:0045893 biological_process positive regulation of transcription, DNA-templated
ENSRNOP00000017962 GO:0005634 cellular_component nucleus
ENSRNOP00000017962 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSRNOP00000017962 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9555 Papio anubis 101004467 9669 Mustela putorius furo 101675391
13735 Pelodiscus sinensis 102449167 6239 Caenorhabditis elegans 171679
9597 Pan paniscus 100982962 39432 Saimiri boliviensis 101039196
10090 Mus musculus 219150 9913 Bos taurus 539099
28377 Anolis carolinensis ENSACAG00000010160 9646 Ailuropoda melanoleuca ENSAMEG00000016028
9796 Equus caballus ENSECAG00000008240 8049 Gadus morhua ENSGMOG00000002742
9785 Loxodonta africana ENSLAFG00000032318 9315 Macropus eugenii ENSMEUG00000015023
9103 Meleagris gallopavo ENSMGAG00000014184 30608 Microcebus murinus ENSMICG00000010422
59463 Myotis lucifugus ENSMLUG00000007478 43179 Ictidomys tridecemlineatus ENSSTOG00000004762
37347 Tupaia belangeri ENSTBEG00000016300 59729 Taeniopygia guttata ENSTGUG00000013324
99883 Tetraodon nigroviridis ENSTNIG00000011904 31033 Takifugu rubripes ENSTRUG00000004378
9598 Pan troglodytes 472727 9615 Canis familiaris 486089
7668 Strongylocentrotus purpuratus 594572 9606 Homo sapiens 79618
9358 Choloepus hoffmanni ENSCHOG00000005538 7719 Ciona intestinalis ENSCING00000003920
51511 Ciona savignyi ENSCSAVG00000002486 7955 Danio rerio ENSDARG00000018913
10020 Dipodomys ordii ENSDORG00000015971 9365 Erinaceus europaeus ENSEEUG00000012849
9371 Echinops telfairi ENSETEG00000012844 9685 Felis catus ENSFCAG00000022672
69293 Gasterosteus aculeatus ENSGACG00000004391 9031 Gallus gallus ENSGALG00000016633
9595 Gorilla gorilla ENSGGOG00000000860 7897 Latimeria chalumnae ENSLACG00000003225
9544 Macaca mulatta ENSMMUG00000014981 13616 Monodelphis domestica ENSMODG00000008788
9258 Ornithorhynchus anatinus ENSOANG00000029417 8128 Oreochromis niloticus ENSONIG00000001328
9978 Ochotona princeps ENSOPRG00000013613 8090 Oryzias latipes ENSORLG00000016242
9813 Procavia capensis ENSPCAG00000012005 9601 Pongo abelii ENSPPYG00000018480
132908 Pteropus vampyrus ENSPVAG00000004238 42254 Sorex araneus ENSSARG00000009365
9305 Sarcophilus harrisii ENSSHAG00000016211 9823 Sus scrofa ENSSSCG00000009682
9478 Tarsius syrichta ENSTSYG00000001109 9739 Tursiops truncatus ENSTTRG00000015467
30538 Vicugna pacos ENSVPAG00000004592 8083 Xiphophorus maculatus ENSXMAG00000001795