Basic Information | |||
Gene ID | 30606 | ||
Gene Name | rarga; nr1b3a, rarg, rarg2; si:dkey-148f24.2 | ||
Full Name | Retinoic acid receptor gamma-A | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | Q91392 | UniGene | Dr.23544 |
PDB | NULL | OMIM | NULL |
KEGG | dre:30606 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
NP_571414 | Gene3D | G3DSA:1.10.565.10 | IPR008946 | 149 | 407 | 4.40e-89 | Nuclear hormone receptor, ligand-binding |
NP_571414 | Gene3D | G3DSA:3.30.50.10 | IPR013088 | 74 | 148 | 1.20e-33 | Zinc finger, NHR/GATA-type |
NP_571414 | Pfam | PF00104 | IPR000536 | 215 | 383 | 1.30e-29 | Nuclear hormone receptor, ligand-binding, core |
NP_571414 | Pfam | PF00105 | IPR001628 | 76 | 144 | 1.30e-32 | Zinc finger, nuclear hormone receptor-type |
NP_571414 | PRINTS | PR00047 | IPR001628 | 126 | 134 | 3.40e-19 | Zinc finger, nuclear hormone receptor-type |
NP_571414 | PRINTS | PR00047 | IPR001628 | 134 | 142 | 3.40e-19 | Zinc finger, nuclear hormone receptor-type |
NP_571414 | PRINTS | PR00047 | IPR001628 | 77 | 93 | 3.40e-19 | Zinc finger, nuclear hormone receptor-type |
NP_571414 | PRINTS | PR00047 | IPR001628 | 93 | 108 | 3.40e-19 | Zinc finger, nuclear hormone receptor-type |
NP_571414 | PRINTS | PR00398 | IPR001723 | 138 | 148 | 1.70e-34 | Steroid hormone receptor |
NP_571414 | PRINTS | PR00398 | IPR001723 | 221 | 242 | 1.70e-34 | Steroid hormone receptor |
NP_571414 | PRINTS | PR00398 | IPR001723 | 242 | 258 | 1.70e-34 | Steroid hormone receptor |
NP_571414 | PRINTS | PR00398 | IPR001723 | 309 | 324 | 1.70e-34 | Steroid hormone receptor |
NP_571414 | PRINTS | PR00398 | IPR001723 | 366 | 383 | 1.70e-34 | Steroid hormone receptor |
NP_571414 | PRINTS | PR01292 | IPR003078 | 143 | 156 | 1.00e-101 | Retinoic acid receptor |
NP_571414 | PRINTS | PR01292 | IPR003078 | 166 | 190 | 1.00e-101 | Retinoic acid receptor |
NP_571414 | PRINTS | PR01292 | IPR003078 | 191 | 207 | 1.00e-101 | Retinoic acid receptor |
NP_571414 | PRINTS | PR01292 | IPR003078 | 213 | 230 | 1.00e-101 | Retinoic acid receptor |
NP_571414 | PRINTS | PR01292 | IPR003078 | 264 | 288 | 1.00e-101 | Retinoic acid receptor |
NP_571414 | PRINTS | PR01292 | IPR003078 | 301 | 313 | 1.00e-101 | Retinoic acid receptor |
NP_571414 | PRINTS | PR01292 | IPR003078 | 331 | 352 | 1.00e-101 | Retinoic acid receptor |
NP_571414 | PRINTS | PR01292 | IPR003078 | 375 | 390 | 1.00e-101 | Retinoic acid receptor |
NP_571414 | PRINTS | PR01292 | IPR003078 | 398 | 411 | 1.00e-101 | Retinoic acid receptor |
NP_571414 | PRINTS | PR01292 | IPR003078 | 49 | 66 | 1.00e-101 | Retinoic acid receptor |
NP_571414 | ProSitePatterns | PS00031 | IPR001628 | 77 | 103 | - | Zinc finger, nuclear hormone receptor-type |
NP_571414 | ProSiteProfiles | PS51030 | IPR001628 | 74 | 149 | 0.00e-00 | Zinc finger, nuclear hormone receptor-type |
NP_571414 | SMART | SM00399 | IPR001628 | 74 | 145 | 4.20e-43 | Zinc finger, nuclear hormone receptor-type |
NP_571414 | SMART | SM00430 | IPR000536 | 220 | 378 | 9.00e-35 | Nuclear hormone receptor, ligand-binding, core |
NP_571414 | SUPERFAMILY | SSF48508 | IPR008946 | 126 | 153 | 0.00e-00 | Nuclear hormone receptor, ligand-binding |
NP_571414 | SUPERFAMILY | SSF48508 | IPR008946 | 186 | 405 | 0.00e-00 | Nuclear hormone receptor, ligand-binding |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
NP_571414 | PF00105 | 1.3e-32 | zf-C4 | Zinc finger, C4 type (two domains) |
NP_571414 | PF00104 | 8e-30 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
NP_571414 | GO:0005634 | cellular_component | nucleus |
NP_571414 | GO:0003677 | molecular_function | DNA binding |
NP_571414 | GO:0003707 | molecular_function | steroid hormone receptor activity |
NP_571414 | GO:0003708 | molecular_function | retinoic acid receptor activity |
NP_571414 | GO:0008270 | molecular_function | zinc ion binding |
NP_571414 | GO:0043565 | molecular_function | sequence-specific DNA binding |