Basic Information | |||
Gene ID | 30607 | ||
Gene Name | thrb; nr1a2, trb; si:ch211-264a6.2 | ||
Full Name | Thyroid hormone receptor beta | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | Q9PVE4 | UniGene | Dr.80868 |
PDB | NULL | OMIM | NULL |
KEGG | dre:30607 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_005159558 | Gene3D | G3DSA:1.10.565.10 | IPR008946 | 201 | 487 | 2.20e-73 | Nuclear hormone receptor, ligand-binding |
XP_005159558 | Gene3D | G3DSA:3.30.50.10 | IPR013088 | 123 | 200 | 1.20e-29 | Zinc finger, NHR/GATA-type |
XP_005159558 | Pfam | PF00104 | IPR000536 | 286 | 458 | 3.20e-23 | Nuclear hormone receptor, ligand-binding, core |
XP_005159558 | Pfam | PF00105 | IPR001628 | 124 | 193 | 1.60e-30 | Zinc finger, nuclear hormone receptor-type |
XP_005159558 | PRINTS | PR00047 | IPR001628 | 125 | 141 | 6.90e-19 | Zinc finger, nuclear hormone receptor-type |
XP_005159558 | PRINTS | PR00047 | IPR001628 | 141 | 156 | 6.90e-19 | Zinc finger, nuclear hormone receptor-type |
XP_005159558 | PRINTS | PR00047 | IPR001628 | 176 | 184 | 6.90e-19 | Zinc finger, nuclear hormone receptor-type |
XP_005159558 | PRINTS | PR00047 | IPR001628 | 184 | 192 | 6.90e-19 | Zinc finger, nuclear hormone receptor-type |
XP_005159558 | PRINTS | PR00398 | IPR001723 | 188 | 198 | 1.60e-30 | Steroid hormone receptor |
XP_005159558 | PRINTS | PR00398 | IPR001723 | 302 | 323 | 1.60e-30 | Steroid hormone receptor |
XP_005159558 | PRINTS | PR00398 | IPR001723 | 323 | 339 | 1.60e-30 | Steroid hormone receptor |
XP_005159558 | PRINTS | PR00398 | IPR001723 | 390 | 405 | 1.60e-30 | Steroid hormone receptor |
XP_005159558 | PRINTS | PR00398 | IPR001723 | 447 | 464 | 1.60e-30 | Steroid hormone receptor |
XP_005159558 | PRINTS | PR00546 | IPR001728 | 113 | 127 | 6.60e-91 | Thyroid hormone receptor |
XP_005159558 | PRINTS | PR00546 | IPR001728 | 151 | 162 | 6.60e-91 | Thyroid hormone receptor |
XP_005159558 | PRINTS | PR00546 | IPR001728 | 190 | 206 | 6.60e-91 | Thyroid hormone receptor |
XP_005159558 | PRINTS | PR00546 | IPR001728 | 207 | 225 | 6.60e-91 | Thyroid hormone receptor |
XP_005159558 | PRINTS | PR00546 | IPR001728 | 230 | 247 | 6.60e-91 | Thyroid hormone receptor |
XP_005159558 | PRINTS | PR00546 | IPR001728 | 253 | 272 | 6.60e-91 | Thyroid hormone receptor |
XP_005159558 | PRINTS | PR00546 | IPR001728 | 299 | 320 | 6.60e-91 | Thyroid hormone receptor |
XP_005159558 | PRINTS | PR00546 | IPR001728 | 325 | 344 | 6.60e-91 | Thyroid hormone receptor |
XP_005159558 | PRINTS | PR00546 | IPR001728 | 390 | 412 | 6.60e-91 | Thyroid hormone receptor |
XP_005159558 | ProSitePatterns | PS00031 | IPR001628 | 125 | 151 | - | Zinc finger, nuclear hormone receptor-type |
XP_005159558 | ProSiteProfiles | PS51030 | IPR001628 | 122 | 199 | 0.00e-00 | Zinc finger, nuclear hormone receptor-type |
XP_005159558 | SMART | SM00399 | IPR001628 | 122 | 195 | 3.90e-41 | Zinc finger, nuclear hormone receptor-type |
XP_005159558 | SMART | SM00430 | IPR000536 | 301 | 459 | 1.60e-34 | Nuclear hormone receptor, ligand-binding, core |
XP_005159558 | SUPERFAMILY | SSF48508 | IPR008946 | 233 | 486 | 0.00e-00 | Nuclear hormone receptor, ligand-binding |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_005159558 | PF00105 | 8.2e-31 | zf-C4 | Zinc finger, C4 type (two domains) |
XP_005159558 | PF00104 | 1.9e-23 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_005159558 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_005159558 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
XP_005159558 | GO:0030522 | biological_process | intracellular receptor signaling pathway |
XP_005159558 | GO:0043401 | biological_process | steroid hormone mediated signaling pathway |
XP_005159558 | GO:0005634 | cellular_component | nucleus |
XP_005159558 | GO:0003677 | molecular_function | DNA binding |
XP_005159558 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
XP_005159558 | GO:0003707 | molecular_function | steroid hormone receptor activity |
XP_005159558 | GO:0004887 | molecular_function | thyroid hormone receptor activity |
XP_005159558 | GO:0008270 | molecular_function | zinc ion binding |
XP_005159558 | GO:0043565 | molecular_function | sequence-specific DNA binding |
XP_005159558 | GO:0046872 | molecular_function | metal ion binding |
XP_005159558 | GO:0070324 | molecular_function | thyroid hormone binding |