Basic Information
Gene ID 30680
Gene Name raraa; nr1b1a, rara2a; zgc:109797
Full Name Retinoic acid receptor alpha-A
Organism Danio rerio [7955]

Cross Reference
UniProt Q90271 UniGene Dr.193
PDB NULL OMIM NULL
KEGG dre:30680 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
XP_005156109 Gene3D G3DSA:1.10.565.10 IPR008946 151 406 1.50e-91 Nuclear hormone receptor, ligand-binding
XP_005156109 Gene3D G3DSA:3.30.50.10 IPR013088 75 150 1.40e-33 Zinc finger, NHR/GATA-type
XP_005156109 Pfam PF00104 IPR000536 211 384 1.30e-29 Nuclear hormone receptor, ligand-binding, core
XP_005156109 Pfam PF00105 IPR001628 77 145 5.50e-33 Zinc finger, nuclear hormone receptor-type
XP_005156109 PRINTS PR00047 IPR001628 127 135 3.00e-19 Zinc finger, nuclear hormone receptor-type
XP_005156109 PRINTS PR00047 IPR001628 135 143 3.00e-19 Zinc finger, nuclear hormone receptor-type
XP_005156109 PRINTS PR00047 IPR001628 78 94 3.00e-19 Zinc finger, nuclear hormone receptor-type
XP_005156109 PRINTS PR00047 IPR001628 94 109 3.00e-19 Zinc finger, nuclear hormone receptor-type
XP_005156109 PRINTS PR00398 IPR001723 139 149 9.90e-35 Steroid hormone receptor
XP_005156109 PRINTS PR00398 IPR001723 221 242 9.90e-35 Steroid hormone receptor
XP_005156109 PRINTS PR00398 IPR001723 242 258 9.90e-35 Steroid hormone receptor
XP_005156109 PRINTS PR00398 IPR001723 309 324 9.90e-35 Steroid hormone receptor
XP_005156109 PRINTS PR00398 IPR001723 366 383 9.90e-35 Steroid hormone receptor
XP_005156109 PRINTS PR01292 IPR003078 144 157 6.40e-101 Retinoic acid receptor
XP_005156109 PRINTS PR01292 IPR003078 166 190 6.40e-101 Retinoic acid receptor
XP_005156109 PRINTS PR01292 IPR003078 191 207 6.40e-101 Retinoic acid receptor
XP_005156109 PRINTS PR01292 IPR003078 213 230 6.40e-101 Retinoic acid receptor
XP_005156109 PRINTS PR01292 IPR003078 264 288 6.40e-101 Retinoic acid receptor
XP_005156109 PRINTS PR01292 IPR003078 301 313 6.40e-101 Retinoic acid receptor
XP_005156109 PRINTS PR01292 IPR003078 331 352 6.40e-101 Retinoic acid receptor
XP_005156109 PRINTS PR01292 IPR003078 375 390 6.40e-101 Retinoic acid receptor
XP_005156109 PRINTS PR01292 IPR003078 398 411 6.40e-101 Retinoic acid receptor
XP_005156109 PRINTS PR01292 IPR003078 50 67 6.40e-101 Retinoic acid receptor
XP_005156109 ProSitePatterns PS00031 IPR001628 78 104 - Zinc finger, nuclear hormone receptor-type
XP_005156109 ProSiteProfiles PS51030 IPR001628 75 150 0.00e-00 Zinc finger, nuclear hormone receptor-type
XP_005156109 SMART SM00399 IPR001628 75 146 4.10e-43 Zinc finger, nuclear hormone receptor-type
XP_005156109 SMART SM00430 IPR000536 220 378 1.20e-35 Nuclear hormone receptor, ligand-binding, core
XP_005156109 SUPERFAMILY SSF48508 IPR008946 126 406 0.00e-00 Nuclear hormone receptor, ligand-binding

Pfam Annotation
Protein Pfam ID E.value Name Description
XP_005156109 PF00105 5.5e-33 zf-C4 Zinc finger, C4 type (two domains)
XP_005156109 PF00104 8.6e-30 Hormone_recep Ligand-binding domain of nuclear hormone receptor

Gene Ontology Annotation
Protein Entry Name Space Description
XP_005156109 GO:0005634 cellular_component nucleus
XP_005156109 GO:0003707 molecular_function steroid hormone receptor activity
XP_005156109 GO:0003708 molecular_function retinoic acid receptor activity
XP_005156109 GO:0008270 molecular_function zinc ion binding
XP_005156109 GO:0043565 molecular_function sequence-specific DNA binding