Basic Information
Gene ID 307305 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Prdm6
Full Name Protein Prdm6
Organism Rattus norvegicus [10116]

Cross Reference
UniProt D3ZQA6 UniGene NULL
PDB NULL OMIM NULL
KEGG rno:307305 UCSC RGD:1559594

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000041369 Gene3D G3DSA:3.30.160.60 IPR013087 502 532 8.30e-11 Zinc finger C2H2-type/integrase DNA-binding domain
ENSRNOP00000041369 Gene3D G3DSA:3.30.160.60 IPR013087 533 553 8.40e-14 Zinc finger C2H2-type/integrase DNA-binding domain
ENSRNOP00000041369 Gene3D G3DSA:3.30.160.60 IPR013087 554 580 3.90e-13 Zinc finger C2H2-type/integrase DNA-binding domain
ENSRNOP00000041369 Pfam PF00096 IPR007087 504 526 6.10e-05 Zinc finger, C2H2
ENSRNOP00000041369 Pfam PF00856 IPR001214 262 367 2.30e-06 SET domain
ENSRNOP00000041369 ProSitePatterns PS00028 IPR007087 506 526 - Zinc finger, C2H2
ENSRNOP00000041369 ProSitePatterns PS00028 IPR007087 534 554 - Zinc finger, C2H2
ENSRNOP00000041369 ProSiteProfiles PS50157 IPR007087 476 503 0.00e-00 Zinc finger, C2H2
ENSRNOP00000041369 ProSiteProfiles PS50157 IPR007087 504 531 0.00e-00 Zinc finger, C2H2
ENSRNOP00000041369 ProSiteProfiles PS50157 IPR007087 532 559 0.00e-00 Zinc finger, C2H2
ENSRNOP00000041369 ProSiteProfiles PS50157 IPR007087 560 587 0.00e-00 Zinc finger, C2H2
ENSRNOP00000041369 ProSiteProfiles PS50280 IPR001214 248 367 0.00e-00 SET domain
ENSRNOP00000041369 SMART SM00317 IPR001214 250 373 6.20e-06 SET domain
ENSRNOP00000041369 SMART SM00355 IPR015880 476 496 4.10e-01 Zinc finger, C2H2-like
ENSRNOP00000041369 SMART SM00355 IPR015880 504 526 5.40e-06 Zinc finger, C2H2-like
ENSRNOP00000041369 SMART SM00355 IPR015880 532 554 4.90e-06 Zinc finger, C2H2-like
ENSRNOP00000041369 SMART SM00355 IPR015880 560 580 4.00e-02 Zinc finger, C2H2-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000041369 PF13465 3.1e-16 zf-H2C2_2 Zinc-finger double domain
ENSRNOP00000041369 PF00096 5.2e-16 zf-C2H2 Zinc finger, C2H2 type
ENSRNOP00000041369 PF13894 1.6e-14 zf-C2H2_4 C2H2-type zinc finger
ENSRNOP00000041369 PF00856 1.8e-07 SET SET domain
ENSRNOP00000041369 PF12171 0.00027 zf-C2H2_jaz Zinc-finger double-stranded RNA-binding

Gene Ontology Annotation
Protein Entry Name Space Description
ENSRNOP00000041369 GO:0006351 biological_process transcription, DNA-templated
ENSRNOP00000041369 GO:0005634 cellular_component nucleus
ENSRNOP00000041369 GO:0046872 molecular_function metal ion binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
10029 Cricetulus griseus 100773424 6087 Hydra magnipapillata 100208645
10224 Saccoglossus kowalevskii 100313707 9597 Pan paniscus 100982491
9555 Papio anubis 101014277 39432 Saimiri boliviensis 101047827
9595 Gorilla gorilla 101143502 10090 Mus musculus 225518
7668 Strongylocentrotus purpuratus 589453 9598 Pan troglodytes 742318
9606 Homo sapiens 93166 28377 Anolis carolinensis ENSACAG00000003401
9646 Ailuropoda melanoleuca ENSAMEG00000015711 9913 Bos taurus ENSBTAG00000023797
9483 Callithrix jacchus ENSCJAG00000017318 10141 Cavia porcellus ENSCPOG00000004258
9361 Dasypus novemcinctus ENSDNOG00000006337 10020 Dipodomys ordii ENSDORG00000009966
9796 Equus caballus ENSECAG00000004532 9371 Echinops telfairi ENSETEG00000005418
9685 Felis catus ENSFCAG00000026249 9785 Loxodonta africana ENSLAFG00000000396
9315 Macropus eugenii ENSMEUG00000011470 59463 Myotis lucifugus ENSMLUG00000010064
9669 Mustela putorius furo ENSMPUG00000012965 61853 Nomascus leucogenys ENSNLEG00000012064
9986 Oryctolagus cuniculus ENSOCUG00000003454 30611 Otolemur garnettii ENSOGAG00000007557
8128 Oreochromis niloticus ENSONIG00000013818 9978 Ochotona princeps ENSOPRG00000004020
7757 Petromyzon marinus ENSPMAG00000006800 9601 Pongo abelii ENSPPYG00000019694
42254 Sorex araneus ENSSARG00000007617 9823 Sus scrofa ENSSSCG00000014238
43179 Ictidomys tridecemlineatus ENSSTOG00000005986 99883 Tetraodon nigroviridis ENSTNIG00000004450
9478 Tarsius syrichta ENSTSYG00000009407 8083 Xiphophorus maculatus ENSXMAG00000010249
9031 Gallus gallus 426800 9615 Canis familiaris ENSCAFG00000023666
9358 Choloepus hoffmanni ENSCHOG00000003085 7955 Danio rerio ENSDARG00000090200
9365 Erinaceus europaeus ENSEEUG00000005543 8049 Gadus morhua ENSGMOG00000016524
7897 Latimeria chalumnae ENSLACG00000003287 9103 Meleagris gallopavo ENSMGAG00000005438
30608 Microcebus murinus ENSMICG00000007754 9544 Macaca mulatta ENSMMUG00000010652
13616 Monodelphis domestica ENSMODG00000007395 9258 Ornithorhynchus anatinus ENSOANG00000001527
8090 Oryzias latipes ENSORLG00000017089 9813 Procavia capensis ENSPCAG00000007467
13735 Pelodiscus sinensis ENSPSIG00000007714 132908 Pteropus vampyrus ENSPVAG00000006781
9305 Sarcophilus harrisii ENSSHAG00000009542 37347 Tupaia belangeri ENSTBEG00000010088
59729 Taeniopygia guttata ENSTGUG00000001115 31033 Takifugu rubripes ENSTRUG00000011582
9739 Tursiops truncatus ENSTTRG00000006808 8364 Xenopus tropicalis ENSXETG00000010261