Basic Information | |||
Gene ID | 307919 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Snai3; Snai3_predicted; rCG_51279 | ||
Full Name | Protein Snai3 | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | D3ZYQ2 | UniGene | Rn.127187 |
PDB | NULL | OMIM | NULL |
KEGG | rno:307919 | UCSC | RGD:1309658 |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000018387 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 178 | 201 | 1.10e-05 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000018387 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 203 | 225 | 2.10e-13 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000018387 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 226 | 254 | 5.80e-17 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000018387 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 255 | 278 | 4.70e-06 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000018387 | Pfam | PF00096 | IPR007087 | 178 | 200 | 1.60e-04 | Zinc finger, C2H2 |
ENSRNOP00000018387 | ProSitePatterns | PS00028 | IPR007087 | 149 | 171 | - | Zinc finger, C2H2 |
ENSRNOP00000018387 | ProSitePatterns | PS00028 | IPR007087 | 180 | 200 | - | Zinc finger, C2H2 |
ENSRNOP00000018387 | ProSitePatterns | PS00028 | IPR007087 | 204 | 226 | - | Zinc finger, C2H2 |
ENSRNOP00000018387 | ProSitePatterns | PS00028 | IPR007087 | 234 | 254 | - | Zinc finger, C2H2 |
ENSRNOP00000018387 | ProSiteProfiles | PS50157 | IPR007087 | 147 | 169 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000018387 | ProSiteProfiles | PS50157 | IPR007087 | 178 | 201 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000018387 | ProSiteProfiles | PS50157 | IPR007087 | 204 | 231 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000018387 | ProSiteProfiles | PS50157 | IPR007087 | 232 | 259 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000018387 | ProSiteProfiles | PS50157 | IPR007087 | 260 | 287 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000018387 | SMART | SM00355 | IPR015880 | 147 | 169 | 1.60e-03 | Zinc finger, C2H2-like |
ENSRNOP00000018387 | SMART | SM00355 | IPR015880 | 178 | 200 | 1.60e-06 | Zinc finger, C2H2-like |
ENSRNOP00000018387 | SMART | SM00355 | IPR015880 | 204 | 226 | 2.80e-05 | Zinc finger, C2H2-like |
ENSRNOP00000018387 | SMART | SM00355 | IPR015880 | 232 | 254 | 7.30e-07 | Zinc finger, C2H2-like |
ENSRNOP00000018387 | SMART | SM00355 | IPR015880 | 260 | 280 | 1.40e-01 | Zinc finger, C2H2-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000018387 | PF00096 | 2.1e-23 | zf-C2H2 | Zinc finger, C2H2 type |
ENSRNOP00000018387 | PF13465 | 6.5e-22 | zf-H2C2_2 | Zinc-finger double domain |
ENSRNOP00000018387 | PF13894 | 3.2e-14 | zf-C2H2_4 | C2H2-type zinc finger |
ENSRNOP00000018387 | PF12171 | 1e-13 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding |
ENSRNOP00000018387 | PF13912 | 6e-08 | zf-C2H2_6 | C2H2-type zinc finger |
ENSRNOP00000018387 | PF12874 | 6.4e-07 | zf-met | Zinc-finger of C2H2 type |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000018387 | GO:0005634 | cellular_component | nucleus |
ENSRNOP00000018387 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
10224 | Saccoglossus kowalevskii | 100303552 | 9646 | Ailuropoda melanoleuca | 100482477 |
34638 | Metaseiulus occidentalis | 100899963 | 9597 | Pan paniscus | 100987251 |
39432 | Saimiri boliviensis | 101030900 | 9595 | Gorilla gorilla | 101142627 |
9669 | Mustela putorius furo | 101671416 | 43179 | Ictidomys tridecemlineatus | 101966747 |
8083 | Xiphophorus maculatus | 102236670 | 59463 | Myotis lucifugus | 102427456 |
6239 | Caenorhabditis elegans | 186874 | 7425 | Nasonia vitripennis | 100114879 |
6087 | Hydra magnipapillata | 100198876 | 59729 | Taeniopygia guttata | 100231698 |
9103 | Meleagris gallopavo | 100548388 | 30195 | Bombus terrestris | 100649706 |
9785 | Loxodonta africana | 100676272 | 132113 | Bombus impatiens | 100745245 |
10029 | Cricetulus griseus | 100766252 | 143995 | Megachile rotundata | 100883895 |
30611 | Otolemur garnettii | 100957589 | 9555 | Papio anubis | 101006877 |
31033 | Takifugu rubripes | 101078301 | 8090 | Oryzias latipes | 101173257 |
10090 | Mus musculus | 20583 | 7227 | Drosophila melanogaster | 34903 |
7668 | Strongylocentrotus purpuratus | 378469 | 7460 | Apis mellifera | 410464 |
9598 | Pan troglodytes | 468070 | 7070 | Tribolium castaneum | 654928 |
9544 | Macaca mulatta | 710815 | 28377 | Anolis carolinensis | ENSACAG00000006701 |
9615 | Canis familiaris | ENSCAFG00000006638 | 9358 | Choloepus hoffmanni | ENSCHOG00000007046 |
7719 | Ciona intestinalis | ENSCING00000008903 | 9483 | Callithrix jacchus | ENSCJAG00000000518 |
10141 | Cavia porcellus | ENSCPOG00000012706 | 7955 | Danio rerio | ENSDARG00000031243 |
9361 | Dasypus novemcinctus | ENSDNOG00000024891 | 9365 | Erinaceus europaeus | ENSEEUG00000000841 |
9371 | Echinops telfairi | ENSETEG00000012148 | 9685 | Felis catus | ENSFCAG00000015779 |
7897 | Latimeria chalumnae | ENSLACG00000004705 | 30608 | Microcebus murinus | ENSMICG00000000335 |
13616 | Monodelphis domestica | ENSMODG00000004165 | 9978 | Ochotona princeps | ENSOPRG00000015227 |
9813 | Procavia capensis | ENSPCAG00000001788 | 9601 | Pongo abelii | ENSPPYG00000011122 |
13735 | Pelodiscus sinensis | ENSPSIG00000004262 | 132908 | Pteropus vampyrus | ENSPVAG00000017357 |
42254 | Sorex araneus | ENSSARG00000003177 | 9305 | Sarcophilus harrisii | ENSSHAG00000006702 |
37347 | Tupaia belangeri | ENSTBEG00000008324 | 99883 | Tetraodon nigroviridis | ENSTNIG00000008504 |
9739 | Tursiops truncatus | ENSTTRG00000006262 | 9913 | Bos taurus | 526694 |
9606 | Homo sapiens | 6591 | 51511 | Ciona savignyi | ENSCSAVG00000009819 |
10020 | Dipodomys ordii | ENSDORG00000011547 | 9796 | Equus caballus | ENSECAG00000012131 |
69293 | Gasterosteus aculeatus | ENSGACG00000017935 | 8049 | Gadus morhua | ENSGMOG00000002669 |
9315 | Macropus eugenii | ENSMEUG00000009510 | 9258 | Ornithorhynchus anatinus | ENSOANG00000008681 |
9986 | Oryctolagus cuniculus | ENSOCUG00000014852 | 9823 | Sus scrofa | ENSSSCG00000024404 |
8364 | Xenopus tropicalis | ENSXETG00000024006 |