Basic Information
Gene ID 315338 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Hoxc10; rCG_50530
Full Name Homeo box C10, isoform CRA_b
Organism Rattus norvegicus [10116]

Cross Reference
UniProt G3V815 UniGene NULL
PDB NULL OMIM NULL
KEGG rno:315338 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000021647 Gene3D G3DSA:1.10.10.60 IPR009057 241 329 2.40e-25 Homeodomain-like
ENSRNOP00000021647 Pfam PF00046 IPR001356 269 325 6.20e-21 Homeobox domain
ENSRNOP00000021647 PRINTS PR00024 IPR020479 290 301 2.20e-07 Homeodomain, metazoa
ENSRNOP00000021647 PRINTS PR00024 IPR020479 305 315 2.20e-07 Homeodomain, metazoa
ENSRNOP00000021647 PRINTS PR00024 IPR020479 315 324 2.20e-07 Homeodomain, metazoa
ENSRNOP00000021647 ProSitePatterns PS00027 IPR017970 301 324 - Homeobox, conserved site
ENSRNOP00000021647 ProSiteProfiles PS50071 IPR001356 266 326 0.00e-00 Homeobox domain
ENSRNOP00000021647 SMART SM00389 IPR001356 268 330 1.10e-29 Homeobox domain
ENSRNOP00000021647 SUPERFAMILY SSF46689 IPR009057 258 328 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000021647 PF00046 2.9e-21 Homeobox Homeobox domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSRNOP00000021647 GO:0006351 biological_process transcription, DNA-templated
ENSRNOP00000021647 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSRNOP00000021647 GO:0007275 biological_process multicellular organismal development
ENSRNOP00000021647 GO:0005634 cellular_component nucleus
ENSRNOP00000021647 GO:0003677 molecular_function DNA binding
ENSRNOP00000021647 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSRNOP00000021647 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
8364 Xenopus tropicalis 100038085 9483 Callithrix jacchus 100413581
9601 Pongo abelii 100457504 61853 Nomascus leucogenys 100585522
9785 Loxodonta africana 100674204 8128 Oreochromis niloticus 100690382
10141 Cavia porcellus 100728360 10029 Cricetulus griseus 100764281
30611 Otolemur garnettii 100944516 9597 Pan paniscus 100979012
9555 Papio anubis 101023785 9685 Felis catus 101089782
9669 Mustela putorius furo 101672009 43179 Ictidomys tridecemlineatus 101962287
59463 Myotis lucifugus 102430965 13735 Pelodiscus sinensis 102446619
7955 Danio rerio 30404 39432 Saimiri boliviensis 101036591
7897 Latimeria chalumnae 102366087 51511 Ciona savignyi ENSCSAVG00000003530
9986 Oryctolagus cuniculus ENSOCUG00000015176 9978 Ochotona princeps ENSOPRG00000004038
59729 Taeniopygia guttata ENSTGUG00000014511 9606 Homo sapiens 3236
9615 Canis familiaris 609973 28377 Anolis carolinensis ENSACAG00000010855
9646 Ailuropoda melanoleuca ENSAMEG00000001849 9913 Bos taurus ENSBTAG00000003278
9358 Choloepus hoffmanni ENSCHOG00000011881 7719 Ciona intestinalis ENSCING00000001031
9361 Dasypus novemcinctus ENSDNOG00000017505 10020 Dipodomys ordii ENSDORG00000006992
9796 Equus caballus ENSECAG00000024985 9365 Erinaceus europaeus ENSEEUG00000003440
9371 Echinops telfairi ENSETEG00000011067 69293 Gasterosteus aculeatus ENSGACG00000004564
9595 Gorilla gorilla ENSGGOG00000001105 8049 Gadus morhua ENSGMOG00000004293
9315 Macropus eugenii ENSMEUG00000001975 9103 Meleagris gallopavo ENSMGAG00000006255
30608 Microcebus murinus ENSMICG00000011712 9544 Macaca mulatta ENSMMUG00000000925
9258 Ornithorhynchus anatinus ENSOANG00000013041 8090 Oryzias latipes ENSORLG00000017540
9813 Procavia capensis ENSPCAG00000010955 132908 Pteropus vampyrus ENSPVAG00000017418
42254 Sorex araneus ENSSARG00000001024 9305 Sarcophilus harrisii ENSSHAG00000006601
9823 Sus scrofa ENSSSCG00000022728 37347 Tupaia belangeri ENSTBEG00000010925
99883 Tetraodon nigroviridis ENSTNIG00000001775 9739 Tursiops truncatus ENSTTRG00000004540
30538 Vicugna pacos ENSVPAG00000010197