Basic Information | |||
Gene ID | 316164 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Satb1; rCG_23620 | ||
Full Name | Protein Satb1 | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | Q5U2Y2 | UniGene | Rn.233782 |
PDB | NULL | OMIM | NULL |
KEGG | rno:316164 | UCSC | RGD:1305561 |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 10116.ENSRNOP00000017557 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000017557 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 634 | 698 | 4.00e-09 | Homeodomain-like |
ENSRNOP00000017557 | Gene3D | G3DSA:1.10.260.40 | IPR010982 | 372 | 442 | 1.20e-27 | Lambda repressor-like, DNA-binding domain |
ENSRNOP00000017557 | Gene3D | G3DSA:1.10.260.40 | IPR010982 | 497 | 564 | 3.60e-21 | Lambda repressor-like, DNA-binding domain |
ENSRNOP00000017557 | Pfam | PF00046 | IPR001356 | 647 | 702 | 1.60e-07 | Homeobox domain |
ENSRNOP00000017557 | Pfam | PF02376 | IPR003350 | 364 | 448 | 8.30e-28 | Homeodomain protein CUT |
ENSRNOP00000017557 | Pfam | PF02376 | IPR003350 | 487 | 570 | 1.50e-23 | Homeodomain protein CUT |
ENSRNOP00000017557 | ProSiteProfiles | PS50071 | IPR001356 | 643 | 704 | 0.00e-00 | Homeobox domain |
ENSRNOP00000017557 | ProSiteProfiles | PS51042 | IPR003350 | 361 | 448 | 0.00e-00 | Homeodomain protein CUT |
ENSRNOP00000017557 | ProSiteProfiles | PS51042 | IPR003350 | 484 | 571 | 0.00e-00 | Homeodomain protein CUT |
ENSRNOP00000017557 | SMART | SM00389 | IPR001356 | 645 | 708 | 2.80e-12 | Homeobox domain |
ENSRNOP00000017557 | SUPERFAMILY | SSF46689 | IPR009057 | 640 | 704 | 0.00e-00 | Homeodomain-like |
ENSRNOP00000017557 | SUPERFAMILY | SSF47413 | IPR010982 | 366 | 450 | 0.00e-00 | Lambda repressor-like, DNA-binding domain |
ENSRNOP00000017557 | SUPERFAMILY | SSF47413 | IPR010982 | 480 | 576 | 0.00e-00 | Lambda repressor-like, DNA-binding domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000017557 | PF02376 | 0 | CUT | CUT domain |
ENSRNOP00000017557 | PF00046 | 6.2e-08 | Homeobox | Homeobox domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000017557 | GO:0000122 | biological_process | negative regulation of transcription from RNA polymerase II promoter |
ENSRNOP00000017557 | GO:0006338 | biological_process | chromatin remodeling |
ENSRNOP00000017557 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSRNOP00000017557 | GO:0005634 | cellular_component | nucleus |
ENSRNOP00000017557 | GO:0016363 | cellular_component | nuclear matrix |
ENSRNOP00000017557 | GO:0003682 | molecular_function | chromatin binding |
ENSRNOP00000017557 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSRNOP00000017557 | GO:0005515 | molecular_function | protein binding |
ENSRNOP00000017557 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
10141 | Cavia porcellus | 100724349 | 10029 | Cricetulus griseus | 100773794 |
9597 | Pan paniscus | 100974951 | 9555 | Papio anubis | 101026994 |
39432 | Saimiri boliviensis | 101036933 | 10090 | Mus musculus | 20230 |
9601 | Pongo abelii | 100448381 | 9606 | Homo sapiens | 23314 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000009099 | 9685 | Felis catus | ENSFCAG00000004295 |
69293 | Gasterosteus aculeatus | ENSGACG00000013013 | 9595 | Gorilla gorilla | ENSGGOG00000001779 |
59463 | Myotis lucifugus | ENSMLUG00000001860 | 9986 | Oryctolagus cuniculus | ENSOCUG00000007174 |
9813 | Procavia capensis | ENSPCAG00000008567 | 9305 | Sarcophilus harrisii | ENSSHAG00000015368 |
9823 | Sus scrofa | ENSSSCG00000011201 | 31033 | Takifugu rubripes | ENSTRUG00000005121 |
9478 | Tarsius syrichta | ENSTSYG00000005284 | 9739 | Tursiops truncatus | ENSTTRG00000006209 |
9031 | Gallus gallus | 420647 | 9598 | Pan troglodytes | 459856 |
9913 | Bos taurus | 516952 | 7955 | Danio rerio | 571757 |
9544 | Macaca mulatta | 696862 | 28377 | Anolis carolinensis | ENSACAG00000007941 |
9615 | Canis familiaris | ENSCAFG00000005839 | 9358 | Choloepus hoffmanni | ENSCHOG00000002142 |
9483 | Callithrix jacchus | ENSCJAG00000003645 | 9361 | Dasypus novemcinctus | ENSDNOG00000025323 |
10020 | Dipodomys ordii | ENSDORG00000005578 | 9796 | Equus caballus | ENSECAG00000010043 |
9365 | Erinaceus europaeus | ENSEEUG00000010435 | 9371 | Echinops telfairi | ENSETEG00000012405 |
8049 | Gadus morhua | ENSGMOG00000007176 | 7897 | Latimeria chalumnae | ENSLACG00000005399 |
9785 | Loxodonta africana | ENSLAFG00000009015 | 9315 | Macropus eugenii | ENSMEUG00000013091 |
9103 | Meleagris gallopavo | ENSMGAG00000010929 | 30608 | Microcebus murinus | ENSMICG00000017153 |
13616 | Monodelphis domestica | ENSMODG00000014765 | 9669 | Mustela putorius furo | ENSMPUG00000001406 |
9258 | Ornithorhynchus anatinus | ENSOANG00000004992 | 30611 | Otolemur garnettii | ENSOGAG00000015441 |
8128 | Oreochromis niloticus | ENSONIG00000008688 | 9978 | Ochotona princeps | ENSOPRG00000002610 |
8090 | Oryzias latipes | ENSORLG00000004761 | 7757 | Petromyzon marinus | ENSPMAG00000005314 |
13735 | Pelodiscus sinensis | ENSPSIG00000004208 | 132908 | Pteropus vampyrus | ENSPVAG00000014668 |
42254 | Sorex araneus | ENSSARG00000006820 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000010856 |
37347 | Tupaia belangeri | ENSTBEG00000005196 | 59729 | Taeniopygia guttata | ENSTGUG00000003198 |
99883 | Tetraodon nigroviridis | ENSTNIG00000011663 | 30538 | Vicugna pacos | ENSVPAG00000011890 |
8364 | Xenopus tropicalis | ENSXETG00000009045 | 8083 | Xiphophorus maculatus | ENSXMAG00000018662 |