Basic Information | |||
Gene ID | 352935 | ||
Gene Name | arntl1b; zfBMAL3 | ||
Full Name | BHLH-PAS transcription factor | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | Q8JIG1 | UniGene | Dr.40654 |
PDB | NULL | OMIM | NULL |
KEGG | dre:352935 | UCSC | NULL |
Protein Interactions | |
DIP | DIP-46454N |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
NP_840085 | Gene3D | G3DSA:4.10.280.10 | IPR011598 | 76 | 129 | 4.40e-22 | Myc-type, basic helix-loop-helix (bHLH) domain |
NP_840085 | Pfam | PF00010 | IPR011598 | 76 | 127 | 1.10e-16 | Myc-type, basic helix-loop-helix (bHLH) domain |
NP_840085 | Pfam | PF00989 | IPR013767 | 151 | 254 | 9.70e-09 | PAS fold |
NP_840085 | PRINTS | PR00785 | IPR001067 | 109 | 129 | 9.40e-87 | Nuclear translocator |
NP_840085 | PRINTS | PR00785 | IPR001067 | 139 | 162 | 9.40e-87 | Nuclear translocator |
NP_840085 | PRINTS | PR00785 | IPR001067 | 164 | 183 | 9.40e-87 | Nuclear translocator |
NP_840085 | PRINTS | PR00785 | IPR001067 | 196 | 214 | 9.40e-87 | Nuclear translocator |
NP_840085 | PRINTS | PR00785 | IPR001067 | 243 | 256 | 9.40e-87 | Nuclear translocator |
NP_840085 | PRINTS | PR00785 | IPR001067 | 281 | 300 | 9.40e-87 | Nuclear translocator |
NP_840085 | PRINTS | PR00785 | IPR001067 | 314 | 330 | 9.40e-87 | Nuclear translocator |
NP_840085 | PRINTS | PR00785 | IPR001067 | 341 | 358 | 9.40e-87 | Nuclear translocator |
NP_840085 | PRINTS | PR00785 | IPR001067 | 89 | 104 | 9.40e-87 | Nuclear translocator |
NP_840085 | ProSiteProfiles | PS50112 | IPR000014 | 145 | 210 | 0.00e-00 | PAS domain |
NP_840085 | ProSiteProfiles | PS50112 | IPR000014 | 349 | 398 | 0.00e-00 | PAS domain |
NP_840085 | ProSiteProfiles | PS50888 | IPR011598 | 74 | 127 | 0.00e-00 | Myc-type, basic helix-loop-helix (bHLH) domain |
NP_840085 | SMART | SM00086 | IPR001610 | 403 | 446 | 1.00e-06 | PAC motif |
NP_840085 | SMART | SM00091 | IPR000014 | 148 | 215 | 9.60e-14 | PAS domain |
NP_840085 | SMART | SM00091 | IPR000014 | 330 | 396 | 1.00e-09 | PAS domain |
NP_840085 | SMART | SM00353 | IPR011598 | 80 | 133 | 1.10e-18 | Myc-type, basic helix-loop-helix (bHLH) domain |
NP_840085 | SUPERFAMILY | SSF47459 | IPR011598 | 74 | 139 | 0.00e-00 | Myc-type, basic helix-loop-helix (bHLH) domain |
NP_840085 | SUPERFAMILY | SSF55785 | IPR000014 | 158 | 212 | 0.00e-00 | PAS domain |
NP_840085 | SUPERFAMILY | SSF55785 | IPR000014 | 240 | 256 | 0.00e-00 | PAS domain |
NP_840085 | SUPERFAMILY | SSF55785 | IPR000014 | 342 | 444 | 0.00e-00 | PAS domain |
NP_840085 | TIGRFAM | TIGR00229 | IPR000014 | 167 | 219 | 9.50e-06 | PAS domain |
NP_840085 | TIGRFAM | TIGR00229 | IPR000014 | 349 | 419 | 1.10e-06 | PAS domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
NP_840085 | PF14598 | 6.4e-27 | PAS_11 | PAS domain |
NP_840085 | PF00989 | 3.2e-21 | PAS | PAS fold |
NP_840085 | PF08447 | 2.4e-17 | PAS_3 | PAS fold |
NP_840085 | PF00010 | 5e-17 | HLH | Helix-loop-helix DNA-binding domain |
NP_840085 | PF13426 | 3.9e-09 | PAS_9 | PAS domain |
NP_840085 | PF08448 | 5.6e-05 | PAS_4 | PAS fold |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
NP_840085 | GO:0006351 | biological_process | transcription, DNA-templated |
NP_840085 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
NP_840085 | GO:0007165 | biological_process | signal transduction |
NP_840085 | GO:0032922 | biological_process | circadian regulation of gene expression |
NP_840085 | GO:0048511 | biological_process | rhythmic process |
NP_840085 | GO:0005634 | cellular_component | nucleus |
NP_840085 | GO:0005667 | cellular_component | transcription factor complex |
NP_840085 | GO:0005737 | cellular_component | cytoplasm |
NP_840085 | GO:0001047 | molecular_function | core promoter binding |
NP_840085 | GO:0003677 | molecular_function | DNA binding |
NP_840085 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
NP_840085 | GO:0004871 | molecular_function | signal transducer activity |
NP_840085 | GO:0046983 | molecular_function | protein dimerization activity |