Basic Information | |||
Gene ID | 386844 | ||
Gene Name | ssrp1a | ||
Full Name | Uncharacterized protein | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | F1QEB4 | UniGene | Dr.75223 |
PDB | NULL | OMIM | NULL |
KEGG | dre:386844 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_005173161 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 545 | 618 | 3.70e-27 | High mobility group box domain |
XP_005173161 | Gene3D | G3DSA:2.30.29.30 | IPR011993 | 2 | 107 | 8.20e-34 | Pleckstrin homology-like domain |
XP_005173161 | Pfam | PF00505 | IPR009071 | 546 | 614 | 3.80e-25 | High mobility group box domain |
XP_005173161 | Pfam | PF03531 | IPR024954 | 74 | 284 | 2.90e-101 | SSRP1 domain |
XP_005173161 | Pfam | PF08512 | IPR013719 | 340 | 428 | 1.70e-26 | Domain of unknown function DUF1747 |
XP_005173161 | PRINTS | PR00887 | IPR000969 | 210 | 226 | 2.00e-75 | Structure-specific recognition protein |
XP_005173161 | PRINTS | PR00887 | IPR000969 | 232 | 248 | 2.00e-75 | Structure-specific recognition protein |
XP_005173161 | PRINTS | PR00887 | IPR000969 | 255 | 271 | 2.00e-75 | Structure-specific recognition protein |
XP_005173161 | PRINTS | PR00887 | IPR000969 | 320 | 333 | 2.00e-75 | Structure-specific recognition protein |
XP_005173161 | PRINTS | PR00887 | IPR000969 | 347 | 365 | 2.00e-75 | Structure-specific recognition protein |
XP_005173161 | PRINTS | PR00887 | IPR000969 | 365 | 382 | 2.00e-75 | Structure-specific recognition protein |
XP_005173161 | PRINTS | PR00887 | IPR000969 | 388 | 404 | 2.00e-75 | Structure-specific recognition protein |
XP_005173161 | PRINTS | PR00887 | IPR000969 | 404 | 422 | 2.00e-75 | Structure-specific recognition protein |
XP_005173161 | ProSiteProfiles | PS50118 | IPR009071 | 546 | 614 | 0.00e-00 | High mobility group box domain |
XP_005173161 | SMART | SM00398 | IPR009071 | 545 | 615 | 5.10e-31 | High mobility group box domain |
XP_005173161 | SUPERFAMILY | SSF47095 | IPR009071 | 537 | 618 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_005173161 | PF03531 | 0 | SSrecog | Structure-specific recognition protein (SSRP1) |
XP_005173161 | PF08512 | 6.5e-27 | Rtt106 | Histone chaperone Rttp106-like |
XP_005173161 | PF00505 | 1.1e-25 | HMG_box | HMG (high mobility group) box |
XP_005173161 | PF09011 | 2.7e-13 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_005173161 | GO:0006260 | biological_process | DNA replication |
XP_005173161 | GO:0006281 | biological_process | DNA repair |
XP_005173161 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
XP_005173161 | GO:0005694 | cellular_component | chromosome |
XP_005173161 | GO:0003677 | molecular_function | DNA binding |