Basic Information
Gene ID 395066
Gene Name sox17a; sox17; TNeu118d15.1
Full Name Transcription factor Sox-17-alpha
Organism Xenopus tropicalis [8364]

Cross Reference
UniProt Q8AWH3 UniGene Str.114
PDB NULL OMIM NULL
KEGG xtr:395066 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 8364.ENSXETP00000053697

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
NP_989425 Gene3D G3DSA:1.10.30.10 IPR009071 60 136 3.50e-34 High mobility group box domain
NP_989425 Pfam PF00505 IPR009071 61 129 2.30e-25 High mobility group box domain
NP_989425 Pfam PF12067 IPR021934 186 381 3.80e-72 Sox C-terminal transactivation domain
NP_989425 ProSiteProfiles PS50118 IPR009071 61 129 0.00e-00 High mobility group box domain
NP_989425 ProSiteProfiles PS51516 IPR021934 267 382 0.00e-00 Sox C-terminal transactivation domain
NP_989425 SMART SM00398 IPR009071 60 130 5.00e-31 High mobility group box domain
NP_989425 SUPERFAMILY SSF47095 IPR009071 54 133 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
NP_989425 PF12067 0 Sox_C_TAD Sox C-terminal transactivation domain
NP_989425 PF00505 1.3e-25 HMG_box HMG (high mobility group) box
NP_989425 PF09011 2.8e-11 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
NP_989425 GO:0006351 biological_process transcription, DNA-templated
NP_989425 GO:0006355 biological_process regulation of transcription, DNA-templated
NP_989425 GO:0007275 biological_process multicellular organismal development
NP_989425 GO:0007369 biological_process gastrulation
NP_989425 GO:0016055 biological_process Wnt signaling pathway
NP_989425 GO:0045893 biological_process positive regulation of transcription, DNA-templated
NP_989425 GO:0045944 biological_process positive regulation of transcription from RNA polymerase II promoter
NP_989425 GO:0005634 cellular_component nucleus
NP_989425 GO:0003677 molecular_function DNA binding
NP_989425 GO:0008013 molecular_function beta-catenin binding
NP_989425 GO:0043565 molecular_function sequence-specific DNA binding