Basic Information
Gene ID 406246
Gene Name sox21b; si:ch211-247e2.1, zgc:110678
Full Name Transcription factor Sox-21-B
Organism Danio rerio [7955]

Cross Reference
UniProt Q6RVD7 UniGene Dr.116538
PDB NULL OMIM NULL
KEGG dre:406246 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 7955.ENSDARP00000023480

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
NP_001009888 Gene3D G3DSA:1.10.30.10 IPR009071 6 87 6.80e-42 High mobility group box domain
NP_001009888 Pfam PF00505 IPR009071 8 76 2.50e-27 High mobility group box domain
NP_001009888 Pfam PF12336 IPR022097 77 96 7.70e-07 Transcription factor SOX
NP_001009888 ProSiteProfiles PS50118 IPR009071 8 76 0.00e-00 High mobility group box domain
NP_001009888 SMART SM00398 IPR009071 7 77 2.70e-31 High mobility group box domain
NP_001009888 SUPERFAMILY SSF47095 IPR009071 6 83 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
NP_001009888 PF00505 1.6e-27 HMG_box HMG (high mobility group) box
NP_001009888 PF09011 6.4e-11 HMG_box_2 HMG-box domain
NP_001009888 PF12336 3.1e-07 SOXp SOX transcription factor

Gene Ontology Annotation
Protein Entry Name Space Description
NP_001009888 GO:0000122 biological_process negative regulation of transcription from RNA polymerase II promoter
NP_001009888 GO:0006351 biological_process transcription, DNA-templated
NP_001009888 GO:0045892 biological_process negative regulation of transcription, DNA-templated
NP_001009888 GO:0005634 cellular_component nucleus
NP_001009888 GO:0043565 molecular_function sequence-specific DNA binding