Basic Information
Gene ID 408884
Gene Name LOC408884
Full Name PREDICTED: transcription factor Sox-6 isoform X2 [Apis mellifera].
Organism Apis mellifera [7460]

Cross Reference
UniProt NULL UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
XP_392414 Gene3D G3DSA:1.10.30.10 IPR009071 323 404 1.10e-35 High mobility group box domain
XP_392414 PANTHER PTHR10270:SF89 IPR027153 302 427 0.00e-00 Transcription factor Sox-6
XP_392414 Pfam PF00505 IPR009071 325 393 3.40e-24 High mobility group box domain
XP_392414 ProSiteProfiles PS50118 IPR009071 325 393 0.00e-00 High mobility group box domain
XP_392414 SMART SM00398 IPR009071 324 394 3.50e-30 High mobility group box domain
XP_392414 SUPERFAMILY SSF47095 IPR009071 324 402 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
XP_392414 PF00505 1.2e-24 HMG_box HMG (high mobility group) box
XP_392414 PF09011 4.6e-09 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
XP_392414 GO:0006351 biological_process transcription, DNA-templated
XP_392414 GO:0006355 biological_process regulation of transcription, DNA-templated
XP_392414 GO:0005634 cellular_component nucleus
XP_392414 GO:0003677 molecular_function DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7463 Apis florea 100863610 7425 Nasonia vitripennis 100119354
30195 Bombus terrestris 100650599 8128 Oreochromis niloticus 100694759
132113 Bombus impatiens 100741472 143995 Megachile rotundata 100882181
34638 Metaseiulus occidentalis 100904962 9555 Papio anubis 101016620
10090 Mus musculus 20679 7227 Drosophila melanogaster 43844
9669 Mustela putorius furo ENSMPUG00000013283 8364 Xenopus tropicalis ENSXETG00000016058
7070 Tribolium castaneum 663268 7757 Petromyzon marinus ENSPMAG00000006026

Paralogs
100576849