Basic Information
Gene ID 445565
Gene Name lhx6
Full Name LIM homeobox 6
Organism Danio rerio [7955]

Cross Reference
UniProt Q6BDC4 UniGene Dr.33994
PDB NULL OMIM NULL
KEGG dre:445565 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 7955.ENSDARP00000017657

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSDARP00000017657 Gene3D G3DSA:1.10.10.60 IPR009057 235 303 2.30e-25 Homeodomain-like
ENSDARP00000017657 Gene3D G3DSA:2.10.110.10 IPR001781 162 214 4.20e-15 Zinc finger, LIM-type
ENSDARP00000017657 Gene3D G3DSA:2.10.110.10 IPR001781 93 161 5.50e-16 Zinc finger, LIM-type
ENSDARP00000017657 Pfam PF00046 IPR001356 247 303 2.10e-19 Homeobox domain
ENSDARP00000017657 Pfam PF00412 IPR001781 158 212 1.60e-15 Zinc finger, LIM-type
ENSDARP00000017657 Pfam PF00412 IPR001781 97 154 1.40e-13 Zinc finger, LIM-type
ENSDARP00000017657 ProSitePatterns PS00027 IPR017970 279 302 - Homeobox, conserved site
ENSDARP00000017657 ProSitePatterns PS00478 IPR001781 158 193 - Zinc finger, LIM-type
ENSDARP00000017657 ProSitePatterns PS00478 IPR001781 97 131 - Zinc finger, LIM-type
ENSDARP00000017657 ProSiteProfiles PS50023 IPR001781 156 218 0.00e-00 Zinc finger, LIM-type
ENSDARP00000017657 ProSiteProfiles PS50023 IPR001781 95 155 0.00e-00 Zinc finger, LIM-type
ENSDARP00000017657 ProSiteProfiles PS50071 IPR001356 244 304 0.00e-00 Homeobox domain
ENSDARP00000017657 SMART SM00132 IPR001781 157 211 1.20e-19 Zinc finger, LIM-type
ENSDARP00000017657 SMART SM00132 IPR001781 96 149 7.20e-15 Zinc finger, LIM-type
ENSDARP00000017657 SMART SM00389 IPR001356 246 308 4.50e-26 Homeobox domain
ENSDARP00000017657 SUPERFAMILY SSF46689 IPR009057 237 304 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSDARP00000017657 PF00412 1.6e-29 LIM LIM domain
ENSDARP00000017657 PF00046 1.2e-19 Homeobox Homeobox domain
ENSDARP00000017657 PF05920 0.00059 Homeobox_KN Homeobox KN domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSDARP00000017657 GO:0005634 cellular_component nucleus
ENSDARP00000017657 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSDARP00000017657 GO:0008270 molecular_function zinc ion binding
ENSDARP00000017657 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
13616 Monodelphis domestica 100014160 7425 Nasonia vitripennis 100116711
7029 Acyrthosiphon pisum 100166565 10224 Saccoglossus kowalevskii 100372943
8128 Oreochromis niloticus 100707712 10029 Cricetulus griseus 100769913
7463 Apis florea 100865575 143995 Megachile rotundata 100878746
34638 Metaseiulus occidentalis 100907946 9597 Pan paniscus 100991624
9555 Papio anubis 101025241 39432 Saimiri boliviensis 101034291
31033 Takifugu rubripes 101069278 9669 Mustela putorius furo 101674221
8083 Xiphophorus maculatus 102229177 10090 Mus musculus 16874
6239 Caenorhabditis elegans 180672 9606 Homo sapiens 26468
9483 Callithrix jacchus 100392368 30195 Bombus terrestris 100650334
132113 Bombus impatiens 100747481 9646 Ailuropoda melanoleuca ENSAMEG00000000780
9615 Canis familiaris ENSCAFG00000020277 9913 Bos taurus 541261
7668 Strongylocentrotus purpuratus 579936 7460 Apis mellifera 725532
10141 Cavia porcellus ENSCPOG00000010682 10020 Dipodomys ordii ENSDORG00000015860
9365 Erinaceus europaeus ENSEEUG00000015531 9371 Echinops telfairi ENSETEG00000009829
9685 Felis catus ENSFCAG00000018842 69293 Gasterosteus aculeatus ENSGACG00000017345
9031 Gallus gallus ENSGALG00000001347 9595 Gorilla gorilla ENSGGOG00000008310
8049 Gadus morhua ENSGMOG00000016580 7897 Latimeria chalumnae ENSLACG00000009230
9785 Loxodonta africana ENSLAFG00000012133 9315 Macropus eugenii ENSMEUG00000011180
30608 Microcebus murinus ENSMICG00000016150 59463 Myotis lucifugus ENSMLUG00000004783
9544 Macaca mulatta ENSMMUG00000011453 9258 Ornithorhynchus anatinus ENSOANG00000004698
9986 Oryctolagus cuniculus ENSOCUG00000008522 30611 Otolemur garnettii ENSOGAG00000015097
9978 Ochotona princeps ENSOPRG00000010365 8090 Oryzias latipes ENSORLG00000009953
132908 Pteropus vampyrus ENSPVAG00000000862 10116 Rattus norvegicus ENSRNOG00000005996
9305 Sarcophilus harrisii ENSSHAG00000011957 9823 Sus scrofa ENSSSCG00000005530
43179 Ictidomys tridecemlineatus ENSSTOG00000012618 59729 Taeniopygia guttata ENSTGUG00000006782
99883 Tetraodon nigroviridis ENSTNIG00000009140 9478 Tarsius syrichta ENSTSYG00000012331
9739 Tursiops truncatus ENSTTRG00000007103 8364 Xenopus tropicalis ENSXETG00000016325