Basic Information | |||
Gene ID | 448197 | ||
Gene Name | zic3 | ||
Full Name | Zinc finger protein ZIC 3 | ||
Organism | Xenopus tropicalis [8364] |
Cross Reference | |||
UniProt | Q6DJQ6 | UniGene | Str.10234 |
PDB | NULL | OMIM | NULL |
KEGG | xtr:448197 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 8364.ENSXETP00000052875 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSXETP00000052876 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 262 | 289 | 2.60e-05 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSXETP00000052876 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 290 | 327 | 1.70e-24 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSXETP00000052876 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 328 | 350 | 2.90e-17 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSXETP00000052876 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 351 | 382 | 2.00e-14 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSXETP00000052876 | Pfam | PF00096 | IPR007087 | 359 | 381 | 4.80e-06 | Zinc finger, C2H2 |
ENSXETP00000052876 | ProSitePatterns | PS00028 | IPR007087 | 301 | 323 | - | Zinc finger, C2H2 |
ENSXETP00000052876 | ProSitePatterns | PS00028 | IPR007087 | 331 | 353 | - | Zinc finger, C2H2 |
ENSXETP00000052876 | ProSitePatterns | PS00028 | IPR007087 | 361 | 381 | - | Zinc finger, C2H2 |
ENSXETP00000052876 | ProSiteProfiles | PS50157 | IPR007087 | 271 | 298 | 0.00e-00 | Zinc finger, C2H2 |
ENSXETP00000052876 | ProSiteProfiles | PS50157 | IPR007087 | 299 | 328 | 0.00e-00 | Zinc finger, C2H2 |
ENSXETP00000052876 | ProSiteProfiles | PS50157 | IPR007087 | 329 | 358 | 0.00e-00 | Zinc finger, C2H2 |
ENSXETP00000052876 | ProSiteProfiles | PS50157 | IPR007087 | 359 | 386 | 0.00e-00 | Zinc finger, C2H2 |
ENSXETP00000052876 | SMART | SM00355 | IPR015880 | 237 | 257 | 1.80e-01 | Zinc finger, C2H2-like |
ENSXETP00000052876 | SMART | SM00355 | IPR015880 | 266 | 293 | 2.10e-02 | Zinc finger, C2H2-like |
ENSXETP00000052876 | SMART | SM00355 | IPR015880 | 299 | 323 | 7.00e-07 | Zinc finger, C2H2-like |
ENSXETP00000052876 | SMART | SM00355 | IPR015880 | 329 | 353 | 5.50e-06 | Zinc finger, C2H2-like |
ENSXETP00000052876 | SMART | SM00355 | IPR015880 | 359 | 381 | 1.60e-07 | Zinc finger, C2H2-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSXETP00000052876 | PF00096 | 1.2e-21 | zf-C2H2 | Zinc finger, C2H2 type |
ENSXETP00000052876 | PF13465 | 8e-21 | zf-H2C2_2 | Zinc-finger double domain |
ENSXETP00000052876 | PF13894 | 1.1e-16 | zf-C2H2_4 | C2H2-type zinc finger |
ENSXETP00000052876 | PF12171 | 1.2e-10 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding |
ENSXETP00000052876 | PF12874 | 6.7e-06 | zf-met | Zinc-finger of C2H2 type |
ENSXETP00000052876 | PF13912 | 8e-05 | zf-C2H2_6 | C2H2-type zinc finger |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSXETP00000052876 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSXETP00000052876 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSXETP00000052876 | GO:0007275 | biological_process | multicellular organismal development |
ENSXETP00000052876 | GO:0007399 | biological_process | nervous system development |
ENSXETP00000052876 | GO:0014034 | biological_process | neural crest cell fate commitment |
ENSXETP00000052876 | GO:0030154 | biological_process | cell differentiation |
ENSXETP00000052876 | GO:0045893 | biological_process | positive regulation of transcription, DNA-templated |
ENSXETP00000052876 | GO:0005634 | cellular_component | nucleus |
ENSXETP00000052876 | GO:0005737 | cellular_component | cytoplasm |
ENSXETP00000052876 | GO:0003676 | molecular_function | nucleic acid binding |
ENSXETP00000052876 | GO:0003677 | molecular_function | DNA binding |
ENSXETP00000052876 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSXETP00000052876 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9823 | Sus scrofa | 100156863 | 6087 | Hydra magnipapillata | 100210883 |
9986 | Oryctolagus cuniculus | 100347605 | 143995 | Megachile rotundata | 100877972 |
30611 | Otolemur garnettii | 100963863 | 9597 | Pan paniscus | 100972338 |
9555 | Papio anubis | 101015377 | 8083 | Xiphophorus maculatus | 102233133 |
7897 | Latimeria chalumnae | 102347692 | 7425 | Nasonia vitripennis | 100121897 |
9483 | Callithrix jacchus | 100394487 | 9646 | Ailuropoda melanoleuca | 100467160 |
8128 | Oreochromis niloticus | 100697514 | 39432 | Saimiri boliviensis | 101048715 |
9595 | Gorilla gorilla | 101126327 | 59463 | Myotis lucifugus | 102430996 |
10116 | Rattus norvegicus | 367944 | 9615 | Canis familiaris | 492171 |
9785 | Loxodonta africana | ENSLAFG00000007048 | 9315 | Macropus eugenii | ENSMEUG00000014290 |
9544 | Macaca mulatta | ENSMMUG00000002023 | 132908 | Pteropus vampyrus | ENSPVAG00000011652 |
59729 | Taeniopygia guttata | ENSTGUG00000002155 | 9913 | Bos taurus | 541035 |
10141 | Cavia porcellus | ENSCPOG00000002374 | 9361 | Dasypus novemcinctus | ENSDNOG00000006192 |
10020 | Dipodomys ordii | ENSDORG00000014318 | 9371 | Echinops telfairi | ENSETEG00000018846 |
69293 | Gasterosteus aculeatus | ENSGACG00000017212 | 8049 | Gadus morhua | ENSGMOG00000004438 |
30608 | Microcebus murinus | ENSMICG00000010339 | 9669 | Mustela putorius furo | ENSMPUG00000001786 |
8090 | Oryzias latipes | ENSORLG00000001654 | 42254 | Sorex araneus | ENSSARG00000012492 |
99883 | Tetraodon nigroviridis | ENSTNIG00000016841 | 31033 | Takifugu rubripes | ENSTRUG00000003550 |
9478 | Tarsius syrichta | ENSTSYG00000003356 | 9739 | Tursiops truncatus | ENSTTRG00000003415 |