Basic Information | |||
Gene ID | 498072 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Hmgb2; Hmg2 | ||
Full Name | High mobility group protein B2 | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | P52925 | UniGene | Rn.2874 |
PDB | NULL | OMIM | NULL |
KEGG | rno:498072 | UCSC | RGD:69291 |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 10116.ENSRNOP00000017635 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
NP_058883 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 8 | 78 | 9.00e-29 | High mobility group box domain |
NP_058883 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 93 | 167 | 5.80e-31 | High mobility group box domain |
NP_058883 | Pfam | PF00505 | IPR009071 | 95 | 163 | 2.10e-26 | High mobility group box domain |
NP_058883 | Pfam | PF09011 | IPR009071 | 6 | 78 | 1.20e-27 | High mobility group box domain |
NP_058883 | ProSitePatterns | PS00353 | IPR017967 | 41 | 52 | - | HMG box A DNA-binding domain, conserved site |
NP_058883 | ProSiteProfiles | PS50118 | IPR009071 | 95 | 163 | 0.00e-00 | High mobility group box domain |
NP_058883 | ProSiteProfiles | PS50118 | IPR009071 | 9 | 79 | 0.00e-00 | High mobility group box domain |
NP_058883 | SMART | SM00398 | IPR009071 | 8 | 80 | 2.10e-27 | High mobility group box domain |
NP_058883 | SMART | SM00398 | IPR009071 | 94 | 164 | 1.40e-33 | High mobility group box domain |
NP_058883 | SUPERFAMILY | SSF47095 | IPR009071 | 3 | 81 | 0.00e-00 | High mobility group box domain |
NP_058883 | SUPERFAMILY | SSF47095 | IPR009071 | 79 | 164 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
NP_058883 | PF09011 | 1.96182e-44 | HMG_box_2 | HMG-box domain |
NP_058883 | PF00505 | 5.395e-43 | HMG_box | HMG (high mobility group) box |
NP_058883 | PF14887 | 0.00042 | HMG_box_5 | HMG (high mobility group) box 5 |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
NP_058883 | GO:0006288 | biological_process | base-excision repair, DNA ligation |
NP_058883 | GO:0006357 | biological_process | regulation of transcription from RNA polymerase II promoter |
NP_058883 | GO:0000793 | cellular_component | condensed chromosome |
NP_058883 | GO:0005634 | cellular_component | nucleus |
NP_058883 | GO:0003677 | molecular_function | DNA binding |
NP_058883 | GO:0008301 | molecular_function | DNA binding, bending |