Basic Information
Gene ID 498160 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Zkscan1
Full Name Zinc finger protein with KRAB and SCAN domains 1
Organism Rattus norvegicus [10116]

Cross Reference
UniProt Q4KLI1 UniGene Rn.113295
PDB NULL OMIM NULL
KEGG rno:498160 UCSC RGD:1560616

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 10116.ENSRNOP00000051042

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
NP_001020931 Gene3D G3DSA:3.30.160.60 IPR013087 374 405 2.90e-17 Zinc finger C2H2-type/integrase DNA-binding domain
NP_001020931 Gene3D G3DSA:3.30.160.60 IPR013087 406 433 8.60e-20 Zinc finger C2H2-type/integrase DNA-binding domain
NP_001020931 Gene3D G3DSA:3.30.160.60 IPR013087 434 461 8.80e-20 Zinc finger C2H2-type/integrase DNA-binding domain
NP_001020931 Gene3D G3DSA:3.30.160.60 IPR013087 462 489 2.70e-22 Zinc finger C2H2-type/integrase DNA-binding domain
NP_001020931 Gene3D G3DSA:3.30.160.60 IPR013087 490 516 4.80e-18 Zinc finger C2H2-type/integrase DNA-binding domain
NP_001020931 Gene3D G3DSA:3.30.160.60 IPR013087 517 542 5.40e-14 Zinc finger C2H2-type/integrase DNA-binding domain
NP_001020931 Pfam PF01352 IPR001909 226 266 5.20e-05 Krueppel-associated box
NP_001020931 Pfam PF02023 IPR003309 51 140 5.90e-42 Transcription regulator SCAN
NP_001020931 ProSitePatterns PS00028 IPR007087 378 398 - Zinc finger, C2H2
NP_001020931 ProSitePatterns PS00028 IPR007087 406 426 - Zinc finger, C2H2
NP_001020931 ProSitePatterns PS00028 IPR007087 434 454 - Zinc finger, C2H2
NP_001020931 ProSitePatterns PS00028 IPR007087 462 482 - Zinc finger, C2H2
NP_001020931 ProSitePatterns PS00028 IPR007087 490 510 - Zinc finger, C2H2
NP_001020931 ProSitePatterns PS00028 IPR007087 518 538 - Zinc finger, C2H2
NP_001020931 ProSiteProfiles PS50157 IPR007087 376 403 0.00e-00 Zinc finger, C2H2
NP_001020931 ProSiteProfiles PS50157 IPR007087 404 431 0.00e-00 Zinc finger, C2H2
NP_001020931 ProSiteProfiles PS50157 IPR007087 432 459 0.00e-00 Zinc finger, C2H2
NP_001020931 ProSiteProfiles PS50157 IPR007087 460 487 0.00e-00 Zinc finger, C2H2
NP_001020931 ProSiteProfiles PS50157 IPR007087 488 515 0.00e-00 Zinc finger, C2H2
NP_001020931 ProSiteProfiles PS50157 IPR007087 516 543 0.00e-00 Zinc finger, C2H2
NP_001020931 ProSiteProfiles PS50804 IPR003309 56 138 0.00e-00 Transcription regulator SCAN
NP_001020931 SMART SM00349 IPR001909 226 286 4.00e-06 Krueppel-associated box
NP_001020931 SMART SM00355 IPR015880 376 398 1.00e-05 Zinc finger, C2H2-like
NP_001020931 SMART SM00355 IPR015880 404 426 5.70e-06 Zinc finger, C2H2-like
NP_001020931 SMART SM00355 IPR015880 432 454 4.40e-06 Zinc finger, C2H2-like
NP_001020931 SMART SM00355 IPR015880 460 482 3.10e-07 Zinc finger, C2H2-like
NP_001020931 SMART SM00355 IPR015880 488 510 3.00e-06 Zinc finger, C2H2-like
NP_001020931 SMART SM00355 IPR015880 516 538 4.40e-06 Zinc finger, C2H2-like
NP_001020931 SMART SM00431 IPR003309 52 162 3.80e-76 Transcription regulator SCAN
NP_001020931 SUPERFAMILY SSF109640 IPR001909 221 269 0.00e-00 Krueppel-associated box
NP_001020931 SUPERFAMILY SSF47353 IPR008916 49 140 0.00e-00 Retrovirus capsid, C-terminal

Pfam Annotation
Protein Pfam ID E.value Name Description
NP_001020931 PF13465 7.84727e-44 zf-H2C2_2 Zinc-finger double domain
NP_001020931 PF02023 2.40042e-42 SCAN SCAN domain
NP_001020931 PF00096 5.1e-38 zf-C2H2 Zinc finger, C2H2 type
NP_001020931 PF13894 5.5e-15 zf-C2H2_4 C2H2-type zinc finger
NP_001020931 PF13912 2.7e-14 zf-C2H2_6 C2H2-type zinc finger
NP_001020931 PF09723 2e-06 Zn-ribbon_8 Zinc ribbon domain
NP_001020931 PF01352 2.9e-05 KRAB KRAB box
NP_001020931 PF01286 0.00029 XPA_N XPA protein N-terminal

Gene Ontology Annotation
Protein Entry Name Space Description
NP_001020931 GO:0006351 biological_process transcription, DNA-templated
NP_001020931 GO:0005634 cellular_component nucleus
NP_001020931 GO:0003677 molecular_function DNA binding
NP_001020931 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
NP_001020931 GO:0046872 molecular_function metal ion binding