Basic Information | |||
Gene ID | 548373 | ||
Gene Name | pms1; pms1-prov | ||
Full Name | Pms1-prov protein | ||
Organism | Xenopus tropicalis [8364] |
Cross Reference | |||
UniProt | Q5FVX9 | UniGene | Str.27224 |
PDB | NULL | OMIM | NULL |
KEGG | xtr:548373 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSXETP00000021769 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 568 | 633 | 1.80e-12 | High mobility group box domain |
ENSXETP00000021769 | Gene3D | G3DSA:3.30.230.10 | IPR014721 | 211 | 344 | 1.50e-26 | Ribosomal protein S5 domain 2-type fold, subgroup |
ENSXETP00000021769 | Gene3D | G3DSA:3.30.565.10 | IPR003594 | 8 | 210 | 1.10e-64 | Histidine kinase-like ATPase, ATP-binding domain |
ENSXETP00000021769 | PANTHER | PTHR10073 | IPR002099 | 3 | 928 | 0.00e-00 | DNA mismatch repair protein family |
ENSXETP00000021769 | Pfam | PF00505 | IPR009071 | 569 | 633 | 1.20e-10 | High mobility group box domain |
ENSXETP00000021769 | Pfam | PF01119 | IPR013507 | 218 | 344 | 3.40e-28 | DNA mismatch repair protein, C-terminal |
ENSXETP00000021769 | ProSitePatterns | PS00058 | IPR014762 | 98 | 104 | - | DNA mismatch repair, conserved site |
ENSXETP00000021769 | ProSiteProfiles | PS50118 | IPR009071 | 569 | 637 | 0.00e-00 | High mobility group box domain |
ENSXETP00000021769 | SMART | SM00387 | IPR003594 | 23 | 158 | 1.60e-03 | Histidine kinase-like ATPase, ATP-binding domain |
ENSXETP00000021769 | SMART | SM00398 | IPR009071 | 568 | 638 | 8.80e-13 | High mobility group box domain |
ENSXETP00000021769 | SUPERFAMILY | SSF47095 | IPR009071 | 557 | 632 | 0.00e-00 | High mobility group box domain |
ENSXETP00000021769 | SUPERFAMILY | SSF54211 | IPR020568 | 199 | 344 | 0.00e-00 | Ribosomal protein S5 domain 2-type fold |
ENSXETP00000021769 | SUPERFAMILY | SSF55874 | IPR003594 | 22 | 206 | 0.00e-00 | Histidine kinase-like ATPase, ATP-binding domain |
ENSXETP00000021769 | TIGRFAM | TIGR00585 | IPR002099 | 7 | 325 | 1.10e-91 | DNA mismatch repair protein family |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSXETP00000021769 | PF01119 | 8e-29 | DNA_mis_repair | DNA mismatch repair protein, C-terminal domain |
ENSXETP00000021769 | PF13589 | 6.5e-13 | HATPase_c_3 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase |
ENSXETP00000021769 | PF02518 | 2.9e-11 | HATPase_c | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase |
ENSXETP00000021769 | PF00505 | 4e-11 | HMG_box | HMG (high mobility group) box |
ENSXETP00000021769 | PF09011 | 4.1e-06 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSXETP00000021769 | GO:0006200 | biological_process | ATP catabolic process |
ENSXETP00000021769 | GO:0006298 | biological_process | mismatch repair |
ENSXETP00000021769 | GO:0007131 | biological_process | reciprocal meiotic recombination |
ENSXETP00000021769 | GO:0032300 | cellular_component | mismatch repair complex |
ENSXETP00000021769 | GO:0032389 | cellular_component | MutLalpha complex |
ENSXETP00000021769 | GO:0003697 | molecular_function | single-stranded DNA binding |
ENSXETP00000021769 | GO:0005524 | molecular_function | ATP binding |
ENSXETP00000021769 | GO:0016887 | molecular_function | ATPase activity |
ENSXETP00000021769 | GO:0032407 | molecular_function | MutSalpha complex binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9597 | Pan paniscus | 100994682 | 39432 | Saimiri boliviensis | 101035016 |
7425 | Nasonia vitripennis | 100124117 | 7029 | Acyrthosiphon pisum | 100163928 |
9646 | Ailuropoda melanoleuca | 100471680 | 30195 | Bombus terrestris | 100650851 |
8128 | Oreochromis niloticus | 100691048 | 132113 | Bombus impatiens | 100749563 |
10029 | Cricetulus griseus | 100751321 | 7463 | Apis florea | 100867362 |
9305 | Sarcophilus harrisii | 100913936 | 9555 | Papio anubis | 100999364 |
9669 | Mustela putorius furo | 101674843 | 7897 | Latimeria chalumnae | 102349367 |
59463 | Myotis lucifugus | 102432563 | 13735 | Pelodiscus sinensis | 102449168 |
9598 | Pan troglodytes | 459827 | 9615 | Canis familiaris | 478840 |
7668 | Strongylocentrotus purpuratus | 592483 | 9358 | Choloepus hoffmanni | ENSCHOG00000012053 |
10141 | Cavia porcellus | ENSCPOG00000002784 | 7955 | Danio rerio | ENSDARG00000000476 |
10020 | Dipodomys ordii | ENSDORG00000000335 | 9371 | Echinops telfairi | ENSETEG00000004643 |
9685 | Felis catus | ENSFCAG00000015491 | 69293 | Gasterosteus aculeatus | ENSGACG00000002634 |
9031 | Gallus gallus | ENSGALG00000002348 | 9595 | Gorilla gorilla | ENSGGOG00000025218 |
9785 | Loxodonta africana | ENSLAFG00000005418 | 9315 | Macropus eugenii | ENSMEUG00000000302 |
9103 | Meleagris gallopavo | ENSMGAG00000006180 | 9258 | Ornithorhynchus anatinus | ENSOANG00000028363 |
9978 | Ochotona princeps | ENSOPRG00000016383 | 8090 | Oryzias latipes | ENSORLG00000015090 |
9813 | Procavia capensis | ENSPCAG00000012223 | 7757 | Petromyzon marinus | ENSPMAG00000002695 |
9601 | Pongo abelii | ENSPPYG00000013018 | 132908 | Pteropus vampyrus | ENSPVAG00000000872 |
10116 | Rattus norvegicus | ENSRNOG00000004076 | 42254 | Sorex araneus | ENSSARG00000011866 |
9823 | Sus scrofa | ENSSSCG00000016045 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000000998 |
37347 | Tupaia belangeri | ENSTBEG00000008266 | 59729 | Taeniopygia guttata | ENSTGUG00000010865 |
99883 | Tetraodon nigroviridis | ENSTNIG00000015715 | 31033 | Takifugu rubripes | ENSTRUG00000012846 |
9478 | Tarsius syrichta | ENSTSYG00000011796 | 9739 | Tursiops truncatus | ENSTTRG00000005245 |
30538 | Vicugna pacos | ENSVPAG00000011417 |