Basic Information
Gene ID 549758
Gene Name sox13; TGas067m20.1
Full Name Transcription factor Sox-13
Organism Xenopus tropicalis [8364]

Cross Reference
UniProt Q28EW4 UniGene Str.11026
PDB NULL OMIM NULL
KEGG xtr:549758 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 8364.ENSXETP00000037344

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
NP_001017004 Gene3D G3DSA:1.10.30.10 IPR009071 377 457 1.80e-33 High mobility group box domain
NP_001017004 Pfam PF00505 IPR009071 378 446 1.50e-22 High mobility group box domain
NP_001017004 ProSiteProfiles PS50118 IPR009071 378 446 0.00e-00 High mobility group box domain
NP_001017004 SMART SM00398 IPR009071 377 447 4.40e-30 High mobility group box domain
NP_001017004 SUPERFAMILY SSF47095 IPR009071 375 450 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
NP_001017004 PF00505 1.3e-22 HMG_box HMG (high mobility group) box
NP_001017004 PF09011 3e-09 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
NP_001017004 GO:0006351 biological_process transcription, DNA-templated
NP_001017004 GO:0006355 biological_process regulation of transcription, DNA-templated
NP_001017004 GO:0005634 cellular_component nucleus
NP_001017004 GO:0003677 molecular_function DNA binding