Basic Information
Gene ID 553572
Gene Name hmg20b; si:dkey-110c1.6; DKEY-268M13.4-001
Full Name High-mobility group 20B
Organism Danio rerio [7955]

Cross Reference
UniProt Q503Z1 UniGene Dr.79503
PDB NULL OMIM NULL
KEGG dre:553572 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSDARP00000061616 Gene3D G3DSA:1.10.30.10 IPR009071 44 124 8.70e-24 High mobility group box domain
ENSDARP00000061616 Pfam PF00505 IPR009071 53 121 5.90e-17 High mobility group box domain
ENSDARP00000061616 ProSiteProfiles PS50118 IPR009071 53 121 0.00e-00 High mobility group box domain
ENSDARP00000061616 SMART SM00398 IPR009071 52 122 1.90e-22 High mobility group box domain
ENSDARP00000061616 SUPERFAMILY SSF47095 IPR009071 39 122 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSDARP00000061616 PF00505 2.8e-17 HMG_box HMG (high mobility group) box
ENSDARP00000061616 PF09011 2.4e-11 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSDARP00000061616 GO:0006351 biological_process transcription, DNA-templated
ENSDARP00000061616 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSDARP00000061616 GO:0005634 cellular_component nucleus
ENSDARP00000061616 GO:0003677 molecular_function DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7425 Nasonia vitripennis 100117847 6087 Hydra magnipapillata 100210175
30195 Bombus terrestris 100646842 10141 Cavia porcellus 100717032
9823 Sus scrofa 100737571 132113 Bombus impatiens 100743290
10029 Cricetulus griseus 100759297 7463 Apis florea 100863063
143995 Megachile rotundata 100878925 34638 Metaseiulus occidentalis 100906238
30611 Otolemur garnettii 100952084 9597 Pan paniscus 100986113
9555 Papio anubis 101023962 39432 Saimiri boliviensis 101034172
9669 Mustela putorius furo 101687625 43179 Ictidomys tridecemlineatus 101968260
7897 Latimeria chalumnae 102346584 9606 Homo sapiens 10363
10116 Rattus norvegicus 315689 8364 Xenopus tropicalis 394538
7029 Acyrthosiphon pisum 100161069 13735 Pelodiscus sinensis 102451794
9913 Bos taurus 513719 7070 Tribolium castaneum 663049
10090 Mus musculus 66867 9646 Ailuropoda melanoleuca ENSAMEG00000005678
9358 Choloepus hoffmanni ENSCHOG00000012116 9685 Felis catus ENSFCAG00000026167
9785 Loxodonta africana ENSLAFG00000007845 9103 Meleagris gallopavo ENSMGAG00000001362
8128 Oreochromis niloticus ENSONIG00000004838 9739 Tursiops truncatus ENSTTRG00000006500
8083 Xiphophorus maculatus ENSXMAG00000012647 7668 Strongylocentrotus purpuratus 585561
28377 Anolis carolinensis ENSACAG00000011520 9615 Canis familiaris ENSCAFG00000019215
9483 Callithrix jacchus ENSCJAG00000003488 51511 Ciona savignyi ENSCSAVG00000001086
10020 Dipodomys ordii ENSDORG00000000623 9365 Erinaceus europaeus ENSEEUG00000004472
9371 Echinops telfairi ENSETEG00000015812 69293 Gasterosteus aculeatus ENSGACG00000012785
9031 Gallus gallus ENSGALG00000027838 9595 Gorilla gorilla ENSGGOG00000014805
8049 Gadus morhua ENSGMOG00000011717 9315 Macropus eugenii ENSMEUG00000001270
30608 Microcebus murinus ENSMICG00000011025 59463 Myotis lucifugus ENSMLUG00000022392
9544 Macaca mulatta ENSMMUG00000007430 13616 Monodelphis domestica ENSMODG00000006884
61853 Nomascus leucogenys ENSNLEG00000002693 9258 Ornithorhynchus anatinus ENSOANG00000013515
9978 Ochotona princeps ENSOPRG00000011000 8090 Oryzias latipes ENSORLG00000004640
9813 Procavia capensis ENSPCAG00000010772 9601 Pongo abelii ENSPPYG00000009378
9598 Pan troglodytes ENSPTRG00000010268 132908 Pteropus vampyrus ENSPVAG00000004300
42254 Sorex araneus ENSSARG00000012609 37347 Tupaia belangeri ENSTBEG00000015283
59729 Taeniopygia guttata ENSTGUG00000000169 99883 Tetraodon nigroviridis ENSTNIG00000010630
31033 Takifugu rubripes ENSTRUG00000016127 9478 Tarsius syrichta ENSTSYG00000003485
30538 Vicugna pacos ENSVPAG00000010013