Basic Information | |||
Gene ID | 555364 | ||
Gene Name | rarab; nr1b1b, rara2b | ||
Full Name | Retinoic acid receptor alpha-B | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | Q7ZTI3 | UniGene | Dr.32291 |
PDB | NULL | OMIM | NULL |
KEGG | dre:555364 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 7955.ENSDARP00000044676 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_005164086 | Gene3D | G3DSA:1.10.565.10 | IPR008946 | 157 | 413 | 1.60e-91 | Nuclear hormone receptor, ligand-binding |
XP_005164086 | Gene3D | G3DSA:3.30.50.10 | IPR013088 | 82 | 156 | 2.80e-33 | Zinc finger, NHR/GATA-type |
XP_005164086 | Pfam | PF00104 | IPR000536 | 222 | 391 | 4.20e-31 | Nuclear hormone receptor, ligand-binding, core |
XP_005164086 | Pfam | PF00105 | IPR001628 | 84 | 152 | 8.70e-33 | Zinc finger, nuclear hormone receptor-type |
XP_005164086 | PRINTS | PR00047 | IPR001628 | 101 | 116 | 3.30e-19 | Zinc finger, nuclear hormone receptor-type |
XP_005164086 | PRINTS | PR00047 | IPR001628 | 134 | 142 | 3.30e-19 | Zinc finger, nuclear hormone receptor-type |
XP_005164086 | PRINTS | PR00047 | IPR001628 | 142 | 150 | 3.30e-19 | Zinc finger, nuclear hormone receptor-type |
XP_005164086 | PRINTS | PR00047 | IPR001628 | 85 | 101 | 3.30e-19 | Zinc finger, nuclear hormone receptor-type |
XP_005164086 | PRINTS | PR00398 | IPR001723 | 146 | 156 | 1.10e-34 | Steroid hormone receptor |
XP_005164086 | PRINTS | PR00398 | IPR001723 | 228 | 249 | 1.10e-34 | Steroid hormone receptor |
XP_005164086 | PRINTS | PR00398 | IPR001723 | 249 | 265 | 1.10e-34 | Steroid hormone receptor |
XP_005164086 | PRINTS | PR00398 | IPR001723 | 316 | 331 | 1.10e-34 | Steroid hormone receptor |
XP_005164086 | PRINTS | PR00398 | IPR001723 | 373 | 390 | 1.10e-34 | Steroid hormone receptor |
XP_005164086 | PRINTS | PR01292 | IPR003078 | 151 | 164 | 5.10e-102 | Retinoic acid receptor |
XP_005164086 | PRINTS | PR01292 | IPR003078 | 173 | 197 | 5.10e-102 | Retinoic acid receptor |
XP_005164086 | PRINTS | PR01292 | IPR003078 | 198 | 214 | 5.10e-102 | Retinoic acid receptor |
XP_005164086 | PRINTS | PR01292 | IPR003078 | 220 | 237 | 5.10e-102 | Retinoic acid receptor |
XP_005164086 | PRINTS | PR01292 | IPR003078 | 271 | 295 | 5.10e-102 | Retinoic acid receptor |
XP_005164086 | PRINTS | PR01292 | IPR003078 | 308 | 320 | 5.10e-102 | Retinoic acid receptor |
XP_005164086 | PRINTS | PR01292 | IPR003078 | 338 | 359 | 5.10e-102 | Retinoic acid receptor |
XP_005164086 | PRINTS | PR01292 | IPR003078 | 382 | 397 | 5.10e-102 | Retinoic acid receptor |
XP_005164086 | PRINTS | PR01292 | IPR003078 | 405 | 418 | 5.10e-102 | Retinoic acid receptor |
XP_005164086 | PRINTS | PR01292 | IPR003078 | 57 | 74 | 5.10e-102 | Retinoic acid receptor |
XP_005164086 | ProSitePatterns | PS00031 | IPR001628 | 85 | 111 | - | Zinc finger, nuclear hormone receptor-type |
XP_005164086 | ProSiteProfiles | PS51030 | IPR001628 | 82 | 157 | 0.00e-00 | Zinc finger, nuclear hormone receptor-type |
XP_005164086 | SMART | SM00399 | IPR001628 | 82 | 153 | 1.70e-42 | Zinc finger, nuclear hormone receptor-type |
XP_005164086 | SMART | SM00430 | IPR000536 | 227 | 385 | 7.00e-37 | Nuclear hormone receptor, ligand-binding, core |
XP_005164086 | SUPERFAMILY | SSF48508 | IPR008946 | 134 | 412 | 0.00e-00 | Nuclear hormone receptor, ligand-binding |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_005164086 | PF00105 | 8.7e-33 | zf-C4 | Zinc finger, C4 type (two domains) |
XP_005164086 | PF00104 | 2.5e-31 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_005164086 | GO:0005634 | cellular_component | nucleus |
XP_005164086 | GO:0003707 | molecular_function | steroid hormone receptor activity |
XP_005164086 | GO:0003708 | molecular_function | retinoic acid receptor activity |
XP_005164086 | GO:0008270 | molecular_function | zinc ion binding |
XP_005164086 | GO:0043565 | molecular_function | sequence-specific DNA binding |