Basic Information | |||
Gene ID | 566352 | ||
Gene Name | arid2 | ||
Full Name | AT rich interactive domain 2 (ARID, RFX-like) | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | A0JPE6 | UniGene | Dr.79170 |
PDB | NULL | OMIM | NULL |
KEGG | dre:566352 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 7955.ENSDARP00000011701 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_005164514 | Gene3D | G3DSA:1.10.10.10 | IPR011991 | 522 | 600 | 8.10e-13 | Winged helix-turn-helix DNA-binding domain |
XP_005164514 | Gene3D | G3DSA:1.10.150.60 | IPR001606 | 11 | 115 | 4.60e-30 | ARID/BRIGHT DNA-binding domain |
XP_005164514 | Gene3D | G3DSA:1.25.10.10 | IPR011989 | 287 | 429 | 1.00e-06 | Armadillo-like helical |
XP_005164514 | Pfam | PF01388 | IPR001606 | 12 | 101 | 9.00e-23 | ARID/BRIGHT DNA-binding domain |
XP_005164514 | Pfam | PF02257 | IPR003150 | 520 | 600 | 1.70e-08 | DNA-binding RFX-type winged-helix domain |
XP_005164514 | ProSitePatterns | PS00028 | IPR007087 | 1381 | 1404 | - | Zinc finger, C2H2 |
XP_005164514 | ProSiteProfiles | PS51011 | IPR001606 | 13 | 105 | 0.00e-00 | ARID/BRIGHT DNA-binding domain |
XP_005164514 | ProSiteProfiles | PS51526 | IPR003150 | 522 | 601 | 0.00e-00 | DNA-binding RFX-type winged-helix domain |
XP_005164514 | SMART | SM00355 | IPR015880 | 1379 | 1404 | 1.60e-02 | Zinc finger, C2H2-like |
XP_005164514 | SMART | SM00355 | IPR015880 | 1412 | 1437 | 4.30e-02 | Zinc finger, C2H2-like |
XP_005164514 | SMART | SM00501 | IPR001606 | 14 | 106 | 4.50e-32 | ARID/BRIGHT DNA-binding domain |
XP_005164514 | SUPERFAMILY | SSF46774 | IPR001606 | 14 | 114 | 0.00e-00 | ARID/BRIGHT DNA-binding domain |
XP_005164514 | SUPERFAMILY | SSF48371 | IPR016024 | 164 | 207 | 0.00e-00 | Armadillo-type fold |
XP_005164514 | SUPERFAMILY | SSF48371 | IPR016024 | 264 | 451 | 0.00e-00 | Armadillo-type fold |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_005164514 | PF01388 | 4.2e-23 | ARID | ARID/BRIGHT DNA binding domain |
XP_005164514 | PF02257 | 7.9e-09 | RFX_DNA_binding | RFX DNA-binding domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_005164514 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_005164514 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
XP_005164514 | GO:0005634 | cellular_component | nucleus |
XP_005164514 | GO:0003677 | molecular_function | DNA binding |