Basic Information | |||
Gene ID | 579474 | ||
Gene Name | LOC579474 | ||
Full Name | PREDICTED: general transcription factor IIF subunit 2-like[Strongylocentrotus purpuratus]. | ||
Organism | Strongylocentrotus purpuratus [7668] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_784682 | Gene3D | G3DSA:1.10.10.10 | IPR011991 | 158 | 190 | 1.50e-11 | Winged helix-turn-helix DNA-binding domain |
XP_784682 | PANTHER | PTHR10445 | IPR003196 | 4 | 197 | 0.00e-00 | Transcription initiation factor IIF, beta subunit |
XP_784682 | Pfam | PF02270 | IPR003196 | 159 | 188 | 1.90e-07 | Transcription initiation factor IIF, beta subunit |
XP_784682 | Pfam | PF02270 | IPR003196 | 5 | 92 | 4.40e-17 | Transcription initiation factor IIF, beta subunit |
XP_784682 | Pfam | PF02270 | IPR003196 | 91 | 155 | 4.00e-10 | Transcription initiation factor IIF, beta subunit |
XP_784682 | SUPERFAMILY | SSF50916 | IPR011039 | 4 | 113 | 0.00e-00 | Transcription Factor IIF, Rap30/Rap74, interaction |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_784682 | PF02270 | 3.9e-37 | TFIIF_beta | Transcription initiation factor IIF, beta subunit |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_784682 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
XP_784682 | GO:0006367 | biological_process | transcription initiation from RNA polymerase II promoter |
XP_784682 | GO:0005674 | cellular_component | transcription factor TFIIF complex |
XP_784682 | GO:0003677 | molecular_function | DNA binding |
XP_784682 | GO:0005524 | molecular_function | ATP binding |
XP_784682 | GO:0008026 | molecular_function | ATP-dependent helicase activity |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7029 | Acyrthosiphon pisum | 100167421 | 9601 | Pongo abelii | 100447986 |
30195 | Bombus terrestris | 100647152 | 8128 | Oreochromis niloticus | 100699655 |
143995 | Megachile rotundata | 100878930 | 9555 | Papio anubis | 101004183 |
9669 | Mustela putorius furo | 101674619 | 43179 | Ictidomys tridecemlineatus | 101957408 |
7227 | Drosophila melanogaster | 41290 | 7460 | Apis mellifera | 551470 |
9796 | Equus caballus | 100050971 | 7425 | Nasonia vitripennis | 100119177 |
9986 | Oryctolagus cuniculus | 100339233 | 9646 | Ailuropoda melanoleuca | 100480731 |
9785 | Loxodonta africana | 100664948 | 10141 | Cavia porcellus | 100715926 |
132113 | Bombus impatiens | 100740836 | 10029 | Cricetulus griseus | 100768332 |
7463 | Apis florea | 100864480 | 30611 | Otolemur garnettii | 100941136 |
9597 | Pan paniscus | 100986478 | 39432 | Saimiri boliviensis | 101045078 |
9685 | Felis catus | 101083822 | 9595 | Gorilla gorilla | 101144785 |
8090 | Oryzias latipes | 101157760 | 9615 | Canis familiaris | 102152240 |
59463 | Myotis lucifugus | 102429913 | 9598 | Pan troglodytes | 741868 |
9358 | Choloepus hoffmanni | ENSCHOG00000007391 | 7955 | Danio rerio | ENSDARG00000006816 |
9371 | Echinops telfairi | ENSETEG00000000072 | 9031 | Gallus gallus | ENSGALG00000016974 |
9315 | Macropus eugenii | ENSMEUG00000002800 | 9103 | Meleagris gallopavo | ENSMGAG00000014989 |
9258 | Ornithorhynchus anatinus | ENSOANG00000022461 | 7757 | Petromyzon marinus | ENSPMAG00000004986 |
99883 | Tetraodon nigroviridis | ENSTNIG00000004440 | 31033 | Takifugu rubripes | ENSTRUG00000018005 |
9739 | Tursiops truncatus | ENSTTRG00000002729 | 8083 | Xiphophorus maculatus | ENSXMAG00000001717 |
7070 | Tribolium castaneum | 656515 | 10116 | Rattus norvegicus | 81674 |
9365 | Erinaceus europaeus | ENSEEUG00000011085 | 69293 | Gasterosteus aculeatus | ENSGACG00000015208 |
8049 | Gadus morhua | ENSGMOG00000018015 | 9544 | Macaca mulatta | ENSMMUG00000012634 |
13616 | Monodelphis domestica | ENSMODG00000025484 |