Basic Information | |||
Gene ID | 580404 | ||
Gene Name | LOC580404 | ||
Full Name | PREDICTED: uncharacterized protein LOC580404 [Strongylocentrotuspurpuratus]. | ||
Organism | Strongylocentrotus purpuratus [7668] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_785557 | Pfam | PF00078 | IPR000477 | 1086 | 1244 | 9.90e-20 | Reverse transcriptase domain |
XP_785557 | Pfam | PF00665 | IPR001584 | 662 | 776 | 1.10e-23 | Integrase, catalytic core |
XP_785557 | Pfam | PF02023 | IPR003309 | 151 | 240 | 6.70e-05 | Transcription regulator SCAN |
XP_785557 | ProSiteProfiles | PS50158 | IPR001878 | 291 | 307 | 0.00e-00 | Zinc finger, CCHC-type |
XP_785557 | ProSiteProfiles | PS50878 | IPR000477 | 1067 | 1244 | 0.00e-00 | Reverse transcriptase domain |
XP_785557 | ProSiteProfiles | PS50994 | IPR001584 | 655 | 819 | 0.00e-00 | Integrase, catalytic core |
XP_785557 | SMART | SM00343 | IPR001878 | 291 | 307 | 2.00e-06 | Zinc finger, CCHC-type |
XP_785557 | SUPERFAMILY | SSF47353 | IPR008916 | 148 | 242 | 0.00e-00 | Retrovirus capsid, C-terminal |
XP_785557 | SUPERFAMILY | SSF53098 | IPR012337 | 659 | 813 | 0.00e-00 | Ribonuclease H-like domain |
XP_785557 | SUPERFAMILY | SSF57756 | IPR001878 | 273 | 313 | 0.00e-00 | Zinc finger, CCHC-type |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_785557 | PF00665 | 5.1e-24 | rve | Integrase core domain |
XP_785557 | PF00078 | 6.2e-20 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) |
XP_785557 | PF02023 | 2.7e-05 | SCAN | SCAN domain |
XP_785557 | PF00098 | 0.00025 | zf-CCHC | Zinc knuckle |
XP_785557 | PF13683 | 0.0003 | rve_3 | Integrase core domain |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
400682 | Amphimedon queenslandica | 100636756 | 8090 | Oryzias latipes | ENSORLG00000013992 |
31033 | Takifugu rubripes | ENSTRUG00000012963 | 13735 | Pelodiscus sinensis | ENSPSIG00000000767 |
Paralogs | |||
580518 | 754648 | 754693 |