Basic Information | |||
Gene ID | 60639 | ||
Gene Name | pax6b; pax6.2 | ||
Full Name | Pax-family transcription factor 6.2 | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | Q9YHZ8 | UniGene | Dr.132861 |
PDB | NULL | OMIM | NULL |
KEGG | dre:60639 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
NP_571716 | Gene3D | G3DSA:1.10.10.10 | IPR011991 | 26 | 91 | 6.20e-41 | Winged helix-turn-helix DNA-binding domain |
NP_571716 | Gene3D | G3DSA:1.10.10.10 | IPR011991 | 92 | 155 | 2.70e-37 | Winged helix-turn-helix DNA-binding domain |
NP_571716 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 205 | 289 | 3.70e-27 | Homeodomain-like |
NP_571716 | Pfam | PF00046 | IPR001356 | 231 | 286 | 6.70e-23 | Homeobox domain |
NP_571716 | Pfam | PF00292 | IPR001523 | 23 | 147 | 2.90e-70 | Paired domain |
NP_571716 | PRINTS | PR00027 | IPR001523 | 27 | 42 | 1.70e-43 | Paired domain |
NP_571716 | PRINTS | PR00027 | IPR001523 | 45 | 63 | 1.70e-43 | Paired domain |
NP_571716 | PRINTS | PR00027 | IPR001523 | 65 | 82 | 1.70e-43 | Paired domain |
NP_571716 | PRINTS | PR00027 | IPR001523 | 83 | 100 | 1.70e-43 | Paired domain |
NP_571716 | ProSitePatterns | PS00027 | IPR017970 | 262 | 285 | - | Homeobox, conserved site |
NP_571716 | ProSitePatterns | PS00034 | IPR001523 | 57 | 73 | - | Paired domain |
NP_571716 | ProSiteProfiles | PS50071 | IPR001356 | 227 | 287 | 0.00e-00 | Homeobox domain |
NP_571716 | ProSiteProfiles | PS51057 | IPR001523 | 23 | 149 | 0.00e-00 | Paired domain |
NP_571716 | SMART | SM00351 | IPR001523 | 23 | 147 | 8.60e-94 | Paired domain |
NP_571716 | SMART | SM00389 | IPR001356 | 229 | 291 | 2.00e-28 | Homeobox domain |
NP_571716 | SUPERFAMILY | SSF46689 | IPR009057 | 210 | 288 | 0.00e-00 | Homeodomain-like |
NP_571716 | SUPERFAMILY | SSF46689 | IPR009057 | 25 | 148 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
NP_571716 | PF00292 | 0 | PAX | 'Paired box' domain |
NP_571716 | PF00046 | 3.3e-23 | Homeobox | Homeobox domain |
NP_571716 | PF12759 | 0.00087 | HTH_Tnp_IS1 | InsA C-terminal domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
NP_571716 | GO:0006351 | biological_process | transcription, DNA-templated |
NP_571716 | GO:0007275 | biological_process | multicellular organismal development |
NP_571716 | GO:0005634 | cellular_component | nucleus |
NP_571716 | GO:0003677 | molecular_function | DNA binding |
NP_571716 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
NP_571716 | GO:0043565 | molecular_function | sequence-specific DNA binding |