Basic Information | |||
Gene ID | 679571 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Hmg1l1; LOC679451; rCG_50935 | ||
Full Name | Protein Hmg1l1 | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | D3ZCR3 | UniGene | Rn.4121 |
PDB | NULL | OMIM | NULL |
KEGG | rno:679571 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
NP_001102843 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 8 | 78 | 9.40e-30 | High mobility group box domain |
NP_001102843 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 93 | 168 | 3.40e-32 | High mobility group box domain |
NP_001102843 | Pfam | PF00505 | IPR009071 | 95 | 163 | 1.40e-27 | High mobility group box domain |
NP_001102843 | Pfam | PF09011 | IPR009071 | 6 | 78 | 3.90e-27 | High mobility group box domain |
NP_001102843 | ProSitePatterns | PS00353 | IPR017967 | 41 | 52 | - | HMG box A DNA-binding domain, conserved site |
NP_001102843 | ProSiteProfiles | PS50118 | IPR009071 | 95 | 163 | 0.00e-00 | High mobility group box domain |
NP_001102843 | ProSiteProfiles | PS50118 | IPR009071 | 9 | 79 | 0.00e-00 | High mobility group box domain |
NP_001102843 | SMART | SM00398 | IPR009071 | 8 | 80 | 2.80e-28 | High mobility group box domain |
NP_001102843 | SMART | SM00398 | IPR009071 | 94 | 164 | 5.50e-33 | High mobility group box domain |
NP_001102843 | SUPERFAMILY | SSF47095 | IPR009071 | 3 | 81 | 0.00e-00 | High mobility group box domain |
NP_001102843 | SUPERFAMILY | SSF47095 | IPR009071 | 77 | 164 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
NP_001102843 | PF09011 | 6.60012e-43 | HMG_box_2 | HMG-box domain |
NP_001102843 | PF00505 | 2.10055e-42 | HMG_box | HMG (high mobility group) box |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
NP_001102843 | GO:0005634 | cellular_component | nucleus |
NP_001102843 | GO:0005694 | cellular_component | chromosome |
NP_001102843 | GO:0003677 | molecular_function | DNA binding |