Basic Information | |||
Gene ID | 70673 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Prdm16; Kiaa1675, Mel1 | ||
Full Name | PR domain zinc finger protein 16 | ||
Organism | Mus musculus [10090] |
Cross Reference | |||
UniProt | A2A935 | UniGene | Mm.257785 |
PDB | NULL | OMIM | NULL |
KEGG | mmu:70673 | UCSC | uc008wbx.1 |
Protein Interactions | |
DIP | DIP-60593N |
IntAct | A2A935 |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSMUSP00000101263 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 1009 | 1034 | 1.60e-06 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSMUSP00000101263 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 282 | 310 | 7.50e-10 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSMUSP00000101263 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 311 | 327 | 2.00e-10 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSMUSP00000101263 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 328 | 359 | 9.70e-10 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSMUSP00000101263 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 367 | 396 | 1.80e-09 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSMUSP00000101263 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 397 | 417 | 5.40e-07 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSMUSP00000101263 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 952 | 981 | 2.70e-13 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSMUSP00000101263 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 982 | 1008 | 5.50e-11 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSMUSP00000101263 | Pfam | PF00096 | IPR007087 | 338 | 361 | 1.00e-05 | Zinc finger, C2H2 |
ENSMUSP00000101263 | Pfam | PF00096 | IPR007087 | 367 | 389 | 2.80e-04 | Zinc finger, C2H2 |
ENSMUSP00000101263 | Pfam | PF00096 | IPR007087 | 395 | 417 | 2.30e-02 | Zinc finger, C2H2 |
ENSMUSP00000101263 | Pfam | PF00096 | IPR007087 | 425 | 446 | 4.80e-04 | Zinc finger, C2H2 |
ENSMUSP00000101263 | ProSitePatterns | PS00028 | IPR007087 | 1011 | 1033 | - | Zinc finger, C2H2 |
ENSMUSP00000101263 | ProSitePatterns | PS00028 | IPR007087 | 284 | 304 | - | Zinc finger, C2H2 |
ENSMUSP00000101263 | ProSitePatterns | PS00028 | IPR007087 | 312 | 332 | - | Zinc finger, C2H2 |
ENSMUSP00000101263 | ProSitePatterns | PS00028 | IPR007087 | 340 | 361 | - | Zinc finger, C2H2 |
ENSMUSP00000101263 | ProSitePatterns | PS00028 | IPR007087 | 369 | 389 | - | Zinc finger, C2H2 |
ENSMUSP00000101263 | ProSitePatterns | PS00028 | IPR007087 | 397 | 417 | - | Zinc finger, C2H2 |
ENSMUSP00000101263 | ProSitePatterns | PS00028 | IPR007087 | 954 | 974 | - | Zinc finger, C2H2 |
ENSMUSP00000101263 | ProSitePatterns | PS00028 | IPR007087 | 982 | 1003 | - | Zinc finger, C2H2 |
ENSMUSP00000101263 | ProSiteProfiles | PS50157 | IPR007087 | 1009 | 1036 | 0.00e-00 | Zinc finger, C2H2 |
ENSMUSP00000101263 | ProSiteProfiles | PS50157 | IPR007087 | 230 | 260 | 0.00e-00 | Zinc finger, C2H2 |
ENSMUSP00000101263 | ProSiteProfiles | PS50157 | IPR007087 | 282 | 309 | 0.00e-00 | Zinc finger, C2H2 |
ENSMUSP00000101263 | ProSiteProfiles | PS50157 | IPR007087 | 310 | 337 | 0.00e-00 | Zinc finger, C2H2 |
ENSMUSP00000101263 | ProSiteProfiles | PS50157 | IPR007087 | 338 | 366 | 0.00e-00 | Zinc finger, C2H2 |
ENSMUSP00000101263 | ProSiteProfiles | PS50157 | IPR007087 | 367 | 394 | 0.00e-00 | Zinc finger, C2H2 |
ENSMUSP00000101263 | ProSiteProfiles | PS50157 | IPR007087 | 395 | 422 | 0.00e-00 | Zinc finger, C2H2 |
ENSMUSP00000101263 | ProSiteProfiles | PS50157 | IPR007087 | 424 | 451 | 0.00e-00 | Zinc finger, C2H2 |
ENSMUSP00000101263 | ProSiteProfiles | PS50157 | IPR007087 | 952 | 979 | 0.00e-00 | Zinc finger, C2H2 |
ENSMUSP00000101263 | ProSiteProfiles | PS50157 | IPR007087 | 980 | 1008 | 0.00e-00 | Zinc finger, C2H2 |
ENSMUSP00000101263 | ProSiteProfiles | PS50280 | IPR001214 | 82 | 211 | 0.00e-00 | SET domain |
ENSMUSP00000101263 | SMART | SM00317 | IPR001214 | 84 | 217 | 4.30e-07 | SET domain |
ENSMUSP00000101263 | SMART | SM00355 | IPR015880 | 1009 | 1031 | 2.40e-05 | Zinc finger, C2H2-like |
ENSMUSP00000101263 | SMART | SM00355 | IPR015880 | 230 | 250 | 9.50e-02 | Zinc finger, C2H2-like |
ENSMUSP00000101263 | SMART | SM00355 | IPR015880 | 282 | 304 | 3.60e-06 | Zinc finger, C2H2-like |
ENSMUSP00000101263 | SMART | SM00355 | IPR015880 | 310 | 332 | 5.50e-07 | Zinc finger, C2H2-like |
ENSMUSP00000101263 | SMART | SM00355 | IPR015880 | 338 | 361 | 1.30e-06 | Zinc finger, C2H2-like |
ENSMUSP00000101263 | SMART | SM00355 | IPR015880 | 367 | 389 | 6.60e-06 | Zinc finger, C2H2-like |
ENSMUSP00000101263 | SMART | SM00355 | IPR015880 | 395 | 417 | 2.70e-04 | Zinc finger, C2H2-like |
ENSMUSP00000101263 | SMART | SM00355 | IPR015880 | 424 | 451 | 3.40e-02 | Zinc finger, C2H2-like |
ENSMUSP00000101263 | SMART | SM00355 | IPR015880 | 952 | 974 | 1.70e-07 | Zinc finger, C2H2-like |
ENSMUSP00000101263 | SMART | SM00355 | IPR015880 | 980 | 1003 | 5.50e-07 | Zinc finger, C2H2-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSMUSP00000101263 | PF00096 | 1.79366e-43 | zf-C2H2 | Zinc finger, C2H2 type |
ENSMUSP00000101263 | PF13465 | 9.4e-31 | zf-H2C2_2 | Zinc-finger double domain |
ENSMUSP00000101263 | PF13894 | 2.4e-26 | zf-C2H2_4 | C2H2-type zinc finger |
ENSMUSP00000101263 | PF13912 | 1.3e-11 | zf-C2H2_6 | C2H2-type zinc finger |
ENSMUSP00000101263 | PF12171 | 9.6e-10 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding |
ENSMUSP00000101263 | PF02892 | 2.4e-05 | zf-BED | BED zinc finger |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSMUSP00000101263 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSMUSP00000101263 | GO:0005634 | cellular_component | nucleus |
ENSMUSP00000101263 | GO:0003677 | molecular_function | DNA binding |
ENSMUSP00000101263 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7425 | Nasonia vitripennis | 100122721 | 7029 | Acyrthosiphon pisum | 100166991 |
30195 | Bombus terrestris | 100649991 | 132113 | Bombus impatiens | 100741168 |
10029 | Cricetulus griseus | 100762301 | 7463 | Apis florea | 100863831 |
7668 | Strongylocentrotus purpuratus | 100892779 | 34638 | Metaseiulus occidentalis | 100908931 |
9597 | Pan paniscus | 100974472 | 9555 | Papio anubis | 101003094 |
39432 | Saimiri boliviensis | 101028887 | 7227 | Drosophila melanogaster | 35135 |
9606 | Homo sapiens | 63976 | 28377 | Anolis carolinensis | ENSACAG00000017766 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000009409 | 9913 | Bos taurus | ENSBTAG00000018965 |
9615 | Canis familiaris | ENSCAFG00000019473 | 7719 | Ciona intestinalis | ENSCING00000018501 |
9483 | Callithrix jacchus | ENSCJAG00000002653 | 10141 | Cavia porcellus | ENSCPOG00000011498 |
51511 | Ciona savignyi | ENSCSAVG00000004543 | 7955 | Danio rerio | ENSDARG00000078324 |
9361 | Dasypus novemcinctus | ENSDNOG00000007746 | 10020 | Dipodomys ordii | ENSDORG00000008385 |
9796 | Equus caballus | ENSECAG00000017045 | 9365 | Erinaceus europaeus | ENSEEUG00000008301 |
9371 | Echinops telfairi | ENSETEG00000001717 | 9685 | Felis catus | ENSFCAG00000013481 |
69293 | Gasterosteus aculeatus | ENSGACG00000006600 | 9031 | Gallus gallus | ENSGALG00000001063 |
9595 | Gorilla gorilla | ENSGGOG00000003763 | 8049 | Gadus morhua | ENSGMOG00000000174 |
7897 | Latimeria chalumnae | ENSLACG00000019020 | 9785 | Loxodonta africana | ENSLAFG00000001071 |
9315 | Macropus eugenii | ENSMEUG00000000257 | 9103 | Meleagris gallopavo | ENSMGAG00000010302 |
30608 | Microcebus murinus | ENSMICG00000004807 | 9544 | Macaca mulatta | ENSMMUG00000009350 |
13616 | Monodelphis domestica | ENSMODG00000019057 | 9669 | Mustela putorius furo | ENSMPUG00000007479 |
61853 | Nomascus leucogenys | ENSNLEG00000008079 | 9258 | Ornithorhynchus anatinus | ENSOANG00000007585 |
9986 | Oryctolagus cuniculus | ENSOCUG00000001153 | 30611 | Otolemur garnettii | ENSOGAG00000005055 |
8128 | Oreochromis niloticus | ENSONIG00000002121 | 9978 | Ochotona princeps | ENSOPRG00000004058 |
8090 | Oryzias latipes | ENSORLG00000004492 | 9601 | Pongo abelii | ENSPPYG00000001968 |
13735 | Pelodiscus sinensis | ENSPSIG00000004093 | 9598 | Pan troglodytes | ENSPTRG00000000059 |
132908 | Pteropus vampyrus | ENSPVAG00000015265 | 9823 | Sus scrofa | ENSSSCG00000021490 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000020440 | 37347 | Tupaia belangeri | ENSTBEG00000009948 |
59729 | Taeniopygia guttata | ENSTGUG00000002807 | 99883 | Tetraodon nigroviridis | ENSTNIG00000011975 |
31033 | Takifugu rubripes | ENSTRUG00000014772 | 9739 | Tursiops truncatus | ENSTTRG00000003430 |
8364 | Xenopus tropicalis | ENSXETG00000012050 | 8083 | Xiphophorus maculatus | ENSXMAG00000019072 |
10116 | Rattus norvegicus | ENSRNOG00000045913 | 9478 | Tarsius syrichta | ENSTSYG00000006257 |