Basic Information
Gene ID 778668
Gene Name Ci-Lmx; lmx
Full Name Transcription factor protein
Organism Ciona intestinalis [7719]

Cross Reference
UniProt Q4H389 UniGene Cin.33621
PDB NULL OMIM NULL
KEGG cin:778668 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 7719.ENSCINP00000014081

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
NP_001071756 Gene3D G3DSA:1.10.10.60 IPR009057 380 444 1.00e-21 Homeodomain-like
NP_001071756 Gene3D G3DSA:2.10.110.10 IPR001781 163 228 3.80e-13 Zinc finger, LIM-type
NP_001071756 Gene3D G3DSA:2.10.110.10 IPR001781 229 292 1.70e-09 Zinc finger, LIM-type
NP_001071756 Pfam PF00046 IPR001356 393 449 7.30e-17 Homeobox domain
NP_001071756 Pfam PF00412 IPR001781 166 220 2.70e-11 Zinc finger, LIM-type
NP_001071756 Pfam PF00412 IPR001781 224 291 4.10e-07 Zinc finger, LIM-type
NP_001071756 ProSitePatterns PS00027 IPR017970 425 448 - Homeobox, conserved site
NP_001071756 ProSitePatterns PS00478 IPR001781 166 200 - Zinc finger, LIM-type
NP_001071756 ProSitePatterns PS00478 IPR001781 224 261 - Zinc finger, LIM-type
NP_001071756 ProSiteProfiles PS50023 IPR001781 164 223 0.00e-00 Zinc finger, LIM-type
NP_001071756 ProSiteProfiles PS50023 IPR001781 224 297 0.00e-00 Zinc finger, LIM-type
NP_001071756 ProSiteProfiles PS50071 IPR001356 390 450 0.00e-00 Homeobox domain
NP_001071756 SMART SM00132 IPR001781 165 216 3.90e-15 Zinc finger, LIM-type
NP_001071756 SMART SM00132 IPR001781 223 280 7.90e-09 Zinc finger, LIM-type
NP_001071756 SMART SM00389 IPR001356 392 454 7.00e-24 Homeobox domain
NP_001071756 SUPERFAMILY SSF46689 IPR009057 383 450 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
NP_001071756 PF00412 6.5e-19 LIM LIM domain
NP_001071756 PF00046 4.1e-17 Homeobox Homeobox domain
NP_001071756 PF05920 5.8e-05 Homeobox_KN Homeobox KN domain

Gene Ontology Annotation
Protein Entry Name Space Description
NP_001071756 GO:0005634 cellular_component nucleus
NP_001071756 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
NP_001071756 GO:0008270 molecular_function zinc ion binding
NP_001071756 GO:0043565 molecular_function sequence-specific DNA binding