Basic Information
Gene ID 778746
Gene Name Ci-RXR; rxr
Full Name Nuclear receptor
Organism Ciona intestinalis [7719]

Cross Reference
UniProt Q4H2U9 UniGene Cin.22124
PDB NULL OMIM NULL
KEGG cin:778746 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 7719.ENSCINP00000003701

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
NP_001071809 Gene3D G3DSA:1.10.565.10 IPR008946 261 488 2.80e-85 Nuclear hormone receptor, ligand-binding
NP_001071809 Gene3D G3DSA:3.30.50.10 IPR013088 165 248 2.40e-34 Zinc finger, NHR/GATA-type
NP_001071809 Pfam PF00104 IPR000536 289 465 2.30e-36 Nuclear hormone receptor, ligand-binding, core
NP_001071809 Pfam PF00105 IPR001628 168 236 1.30e-31 Zinc finger, nuclear hormone receptor-type
NP_001071809 PRINTS PR00047 IPR001628 169 185 1.60e-18 Zinc finger, nuclear hormone receptor-type
NP_001071809 PRINTS PR00047 IPR001628 185 200 1.60e-18 Zinc finger, nuclear hormone receptor-type
NP_001071809 PRINTS PR00047 IPR001628 218 226 1.60e-18 Zinc finger, nuclear hormone receptor-type
NP_001071809 PRINTS PR00047 IPR001628 226 234 1.60e-18 Zinc finger, nuclear hormone receptor-type
NP_001071809 PRINTS PR00398 IPR001723 230 240 4.40e-33 Steroid hormone receptor
NP_001071809 PRINTS PR00398 IPR001723 294 315 4.40e-33 Steroid hormone receptor
NP_001071809 PRINTS PR00398 IPR001723 315 331 4.40e-33 Steroid hormone receptor
NP_001071809 PRINTS PR00398 IPR001723 383 398 4.40e-33 Steroid hormone receptor
NP_001071809 PRINTS PR00398 IPR001723 440 457 4.40e-33 Steroid hormone receptor
NP_001071809 PRINTS PR00545 IPR000003 237 250 1.50e-38 Retinoid X receptor/HNF4
NP_001071809 PRINTS PR00545 IPR000003 345 370 1.50e-38 Retinoid X receptor/HNF4
NP_001071809 PRINTS PR00545 IPR000003 371 389 1.50e-38 Retinoid X receptor/HNF4
NP_001071809 PRINTS PR00545 IPR000003 412 431 1.50e-38 Retinoid X receptor/HNF4
NP_001071809 ProSitePatterns PS00031 IPR001628 169 195 - Zinc finger, nuclear hormone receptor-type
NP_001071809 ProSiteProfiles PS51030 IPR001628 166 241 0.00e-00 Zinc finger, nuclear hormone receptor-type
NP_001071809 SMART SM00399 IPR001628 166 237 9.30e-41 Zinc finger, nuclear hormone receptor-type
NP_001071809 SMART SM00430 IPR000536 293 452 1.60e-48 Nuclear hormone receptor, ligand-binding, core
NP_001071809 SUPERFAMILY SSF48508 IPR008946 219 476 0.00e-00 Nuclear hormone receptor, ligand-binding

Pfam Annotation
Protein Pfam ID E.value Name Description
NP_001071809 PF00104 1.7e-36 Hormone_recep Ligand-binding domain of nuclear hormone receptor
NP_001071809 PF00105 7.9e-32 zf-C4 Zinc finger, C4 type (two domains)

Gene Ontology Annotation
Protein Entry Name Space Description
NP_001071809 GO:0045944 biological_process positive regulation of transcription from RNA polymerase II promoter
NP_001071809 GO:0005634 cellular_component nucleus
NP_001071809 GO:0003707 molecular_function steroid hormone receptor activity
NP_001071809 GO:0004886 molecular_function 9-cis retinoic acid receptor activity
NP_001071809 GO:0008270 molecular_function zinc ion binding
NP_001071809 GO:0043565 molecular_function sequence-specific DNA binding