Basic Information | |||
Gene ID | 779866 | ||
Gene Name | spdef | ||
Full Name | SAM pointed domain containing ets transcription factor | ||
Organism | Xenopus tropicalis [8364] |
Cross Reference | |||
UniProt | Q0V9C6 | UniGene | Str.41169 |
PDB | NULL | OMIM | NULL |
KEGG | xtr:779866 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
NP_001072412 | Gene3D | G3DSA:1.10.10.10 | IPR011991 | 223 | 315 | 1.10e-36 | Winged helix-turn-helix DNA-binding domain |
NP_001072412 | Gene3D | G3DSA:1.10.150.50 | IPR013761 | 117 | 198 | 1.50e-25 | Sterile alpha motif/pointed domain |
NP_001072412 | Pfam | PF00178 | IPR000418 | 231 | 315 | 3.40e-33 | Ets domain |
NP_001072412 | Pfam | PF02198 | IPR003118 | 112 | 192 | 1.90e-23 | Pointed domain |
NP_001072412 | PRINTS | PR00454 | IPR000418 | 231 | 244 | 2.30e-17 | Ets domain |
NP_001072412 | PRINTS | PR00454 | IPR000418 | 257 | 275 | 2.30e-17 | Ets domain |
NP_001072412 | PRINTS | PR00454 | IPR000418 | 276 | 294 | 2.30e-17 | Ets domain |
NP_001072412 | PRINTS | PR00454 | IPR000418 | 296 | 314 | 2.30e-17 | Ets domain |
NP_001072412 | ProSitePatterns | PS00345 | IPR000418 | 233 | 241 | - | Ets domain |
NP_001072412 | ProSitePatterns | PS00346 | IPR000418 | 279 | 294 | - | Ets domain |
NP_001072412 | ProSiteProfiles | PS50061 | IPR000418 | 231 | 314 | 0.00e-00 | Ets domain |
NP_001072412 | ProSiteProfiles | PS51433 | IPR003118 | 109 | 193 | 0.00e-00 | Pointed domain |
NP_001072412 | SMART | SM00251 | IPR003118 | 111 | 193 | 4.50e-34 | Pointed domain |
NP_001072412 | SMART | SM00413 | IPR000418 | 230 | 317 | 1.10e-47 | Ets domain |
NP_001072412 | SUPERFAMILY | SSF47769 | IPR013761 | 92 | 194 | 0.00e-00 | Sterile alpha motif/pointed domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
NP_001072412 | PF00178 | 3.4e-33 | Ets | Ets-domain |
NP_001072412 | PF02198 | 1e-23 | SAM_PNT | Sterile alpha motif (SAM)/Pointed domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
NP_001072412 | GO:0005634 | cellular_component | nucleus |
NP_001072412 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
NP_001072412 | GO:0043565 | molecular_function | sequence-specific DNA binding |