Basic Information | |||
Gene ID | ENSCSAVG00000003053 | ||
Gene Name | Csa.10127 | ||
Full Name | Uncharacterized protein | ||
Organism | Ciona savignyi [51511] |
Cross Reference | |||
UniProt | H2YIG1 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSCSAVP00000005111 | Gene3D | G3DSA:2.40.50.140 | IPR012340 | 27 | 94 | 1.20e-22 | Nucleic acid-binding, OB-fold |
ENSCSAVP00000005111 | Pfam | PF00313 | IPR002059 | 27 | 95 | 1.60e-24 | Cold-shock protein, DNA-binding |
ENSCSAVP00000005111 | PRINTS | PR00050 | IPR002059 | 28 | 43 | 6.90e-20 | Cold-shock protein, DNA-binding |
ENSCSAVP00000005111 | PRINTS | PR00050 | IPR002059 | 49 | 58 | 6.90e-20 | Cold-shock protein, DNA-binding |
ENSCSAVP00000005111 | PRINTS | PR00050 | IPR002059 | 68 | 86 | 6.90e-20 | Cold-shock protein, DNA-binding |
ENSCSAVP00000005111 | SMART | SM00357 | IPR011129 | 27 | 96 | 1.10e-22 | Cold shock protein |
ENSCSAVP00000005111 | SUPERFAMILY | SSF50249 | IPR012340 | 23 | 95 | 0.00e-00 | Nucleic acid-binding, OB-fold |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSCSAVP00000005111 | PF00313 | 1e-24 | CSD | 'Cold-shock' DNA-binding domain |
ENSCSAVP00000005111 | PF08206 | 3.5e-05 | OB_RNB | Ribonuclease B OB domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSCSAVP00000005111 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSCSAVP00000005111 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSCSAVP00000005111 | GO:0008380 | biological_process | RNA splicing |
ENSCSAVP00000005111 | GO:0005634 | cellular_component | nucleus |
ENSCSAVP00000005111 | GO:0005737 | cellular_component | cytoplasm |
ENSCSAVP00000005111 | GO:0071204 | cellular_component | histone pre-mRNA 3'end processing complex |
ENSCSAVP00000005111 | GO:0003677 | molecular_function | DNA binding |
ENSCSAVP00000005111 | GO:0003723 | molecular_function | RNA binding |