Basic Information | |||
Gene ID | ENSDARG00000027082 | ||
Gene Name | hmbox1a | ||
Full Name | Uncharacterized protein | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | F1RBW1 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSDARP00000037056 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 273 | 356 | 1.40e-34 | Homeodomain-like |
ENSDARP00000037056 | Gene3D | G3DSA:1.10.260.40 | IPR010982 | 160 | 249 | 1.10e-32 | Lambda repressor-like, DNA-binding domain |
ENSDARP00000037056 | Pfam | PF00046 | IPR001356 | 281 | 351 | 2.60e-10 | Homeobox domain |
ENSDARP00000037056 | Pfam | PF04814 | IPR006899 | 13 | 238 | 9.60e-12 | Hepatocyte nuclear factor 1, N-terminal |
ENSDARP00000037056 | ProSiteProfiles | PS50071 | IPR001356 | 277 | 352 | 0.00e-00 | Homeobox domain |
ENSDARP00000037056 | SMART | SM00389 | IPR001356 | 279 | 356 | 4.20e-11 | Homeobox domain |
ENSDARP00000037056 | SUPERFAMILY | SSF46689 | IPR009057 | 274 | 356 | 0.00e-00 | Homeodomain-like |
ENSDARP00000037056 | SUPERFAMILY | SSF47413 | IPR010982 | 162 | 246 | 0.00e-00 | Lambda repressor-like, DNA-binding domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSDARP00000037056 | PF04814 | 1.5e-12 | HNF-1_N | Hepatocyte nuclear factor 1 (HNF-1), N terminus |
ENSDARP00000037056 | PF00046 | 2.5e-10 | Homeobox | Homeobox domain |
ENSDARP00000037056 | PF05920 | 5.3e-05 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSDARP00000037056 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSDARP00000037056 | GO:0045893 | biological_process | positive regulation of transcription, DNA-templated |
ENSDARP00000037056 | GO:0005634 | cellular_component | nucleus |
ENSDARP00000037056 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSDARP00000037056 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
8049 | Gadus morhua | ENSGMOG00000002742 | 42254 | Sorex araneus | ENSSARG00000009365 |
30538 | Vicugna pacos | ENSVPAG00000004592 | 10020 | Dipodomys ordii | ENSDORG00000015971 |
Paralogs | |||
ENSDARG00000018913 |