Basic Information
Gene ID ENSDARG00000054003
Gene Name rargb
Full Name Retinoic acid receptor gamma-B
Organism Danio rerio [7955]

Cross Reference
UniProt G1K2L7 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSDARP00000052545 Gene3D G3DSA:1.10.565.10 IPR008946 153 411 1.90e-88 Nuclear hormone receptor, ligand-binding
ENSDARP00000052545 Gene3D G3DSA:3.30.50.10 IPR013088 78 152 1.30e-33 Zinc finger, NHR/GATA-type
ENSDARP00000052545 Pfam PF00104 IPR000536 220 387 3.50e-30 Nuclear hormone receptor, ligand-binding, core
ENSDARP00000052545 Pfam PF00105 IPR001628 80 148 1.30e-32 Zinc finger, nuclear hormone receptor-type
ENSDARP00000052545 PRINTS PR00047 IPR001628 130 138 3.00e-19 Zinc finger, nuclear hormone receptor-type
ENSDARP00000052545 PRINTS PR00047 IPR001628 138 146 3.00e-19 Zinc finger, nuclear hormone receptor-type
ENSDARP00000052545 PRINTS PR00047 IPR001628 81 97 3.00e-19 Zinc finger, nuclear hormone receptor-type
ENSDARP00000052545 PRINTS PR00047 IPR001628 97 112 3.00e-19 Zinc finger, nuclear hormone receptor-type
ENSDARP00000052545 PRINTS PR00398 IPR001723 142 152 1.70e-34 Steroid hormone receptor
ENSDARP00000052545 PRINTS PR00398 IPR001723 225 246 1.70e-34 Steroid hormone receptor
ENSDARP00000052545 PRINTS PR00398 IPR001723 246 262 1.70e-34 Steroid hormone receptor
ENSDARP00000052545 PRINTS PR00398 IPR001723 313 328 1.70e-34 Steroid hormone receptor
ENSDARP00000052545 PRINTS PR00398 IPR001723 370 387 1.70e-34 Steroid hormone receptor
ENSDARP00000052545 PRINTS PR01292 IPR003078 147 160 4.90e-100 Retinoic acid receptor
ENSDARP00000052545 PRINTS PR01292 IPR003078 170 194 4.90e-100 Retinoic acid receptor
ENSDARP00000052545 PRINTS PR01292 IPR003078 195 211 4.90e-100 Retinoic acid receptor
ENSDARP00000052545 PRINTS PR01292 IPR003078 217 234 4.90e-100 Retinoic acid receptor
ENSDARP00000052545 PRINTS PR01292 IPR003078 268 292 4.90e-100 Retinoic acid receptor
ENSDARP00000052545 PRINTS PR01292 IPR003078 305 317 4.90e-100 Retinoic acid receptor
ENSDARP00000052545 PRINTS PR01292 IPR003078 335 356 4.90e-100 Retinoic acid receptor
ENSDARP00000052545 PRINTS PR01292 IPR003078 379 394 4.90e-100 Retinoic acid receptor
ENSDARP00000052545 PRINTS PR01292 IPR003078 402 415 4.90e-100 Retinoic acid receptor
ENSDARP00000052545 PRINTS PR01292 IPR003078 53 70 4.90e-100 Retinoic acid receptor
ENSDARP00000052545 ProSitePatterns PS00031 IPR001628 81 107 - Zinc finger, nuclear hormone receptor-type
ENSDARP00000052545 ProSiteProfiles PS51030 IPR001628 78 153 0.00e-00 Zinc finger, nuclear hormone receptor-type
ENSDARP00000052545 SMART SM00399 IPR001628 78 149 4.20e-43 Zinc finger, nuclear hormone receptor-type
ENSDARP00000052545 SMART SM00430 IPR000536 224 382 2.50e-34 Nuclear hormone receptor, ligand-binding, core
ENSDARP00000052545 SUPERFAMILY SSF48508 IPR008946 130 409 0.00e-00 Nuclear hormone receptor, ligand-binding

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSDARP00000052545 PF00105 1.3e-32 zf-C4 Zinc finger, C4 type (two domains)
ENSDARP00000052545 PF00104 2.1e-30 Hormone_recep Ligand-binding domain of nuclear hormone receptor

Gene Ontology Annotation
Protein Entry Name Space Description
ENSDARP00000052545 GO:0005634 cellular_component nucleus
ENSDARP00000052545 GO:0003677 molecular_function DNA binding
ENSDARP00000052545 GO:0003707 molecular_function steroid hormone receptor activity
ENSDARP00000052545 GO:0003708 molecular_function retinoic acid receptor activity
ENSDARP00000052545 GO:0008270 molecular_function zinc ion binding
ENSDARP00000052545 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9796 Equus caballus 100062026 10224 Saccoglossus kowalevskii 100313752
30195 Bombus terrestris 100642535 8128 Oreochromis niloticus 100707970
132113 Bombus impatiens 100741960 143995 Megachile rotundata 100884030
9685 Felis catus 101083275 9669 Mustela putorius furo 101684419
8083 Xiphophorus maculatus 102236110 7897 Latimeria chalumnae 102356597
59463 Myotis lucifugus 102425322 10090 Mus musculus 19411
7668 Strongylocentrotus purpuratus 574567 59729 Taeniopygia guttata 778446
9913 Bos taurus ENSBTAG00000011518 9615 Canis familiaris ENSCAFG00000016173
9483 Callithrix jacchus ENSCJAG00000003911 10141 Cavia porcellus ENSCPOG00000014819
8090 Oryzias latipes 100125516 9103 Meleagris gallopavo 100545327
10029 Cricetulus griseus 100769591 9305 Sarcophilus harrisii 100920749
9597 Pan paniscus 100988215 9555 Papio anubis 101014448
39432 Saimiri boliviensis 101028779 43179 Ictidomys tridecemlineatus 101976820
13735 Pelodiscus sinensis 102448036 9031 Gallus gallus 396266
9606 Homo sapiens 5916 10116 Rattus norvegicus 685072
9598 Pan troglodytes 745516 28377 Anolis carolinensis ENSACAG00000006832
9646 Ailuropoda melanoleuca ENSAMEG00000012299 9358 Choloepus hoffmanni ENSCHOG00000008395
7719 Ciona intestinalis ENSCING00000006945 51511 Ciona savignyi ENSCSAVG00000006794
8049 Gadus morhua ENSGMOG00000017824 9785 Loxodonta africana ENSLAFG00000008347
9315 Macropus eugenii ENSMEUG00000005385 30608 Microcebus murinus ENSMICG00000013447
13616 Monodelphis domestica ENSMODG00000014926 9986 Oryctolagus cuniculus ENSOCUG00000000714
30611 Otolemur garnettii ENSOGAG00000026655 9978 Ochotona princeps ENSOPRG00000005114
9813 Procavia capensis ENSPCAG00000012059 7757 Petromyzon marinus ENSPMAG00000000088
9601 Pongo abelii ENSPPYG00000014062 132908 Pteropus vampyrus ENSPVAG00000012533
9823 Sus scrofa ENSSSCG00000011212 31033 Takifugu rubripes ENSTRUG00000005047
9739 Tursiops truncatus ENSTTRG00000002778 9361 Dasypus novemcinctus ENSDNOG00000010433
10020 Dipodomys ordii ENSDORG00000016232 9365 Erinaceus europaeus ENSEEUG00000006140
9371 Echinops telfairi ENSETEG00000001526 69293 Gasterosteus aculeatus ENSGACG00000009372
9595 Gorilla gorilla ENSGGOG00000003215 9544 Macaca mulatta ENSMMUG00000007367
61853 Nomascus leucogenys ENSNLEG00000001793 9258 Ornithorhynchus anatinus ENSOANG00000012236
42254 Sorex araneus ENSSARG00000003129 37347 Tupaia belangeri ENSTBEG00000015684
99883 Tetraodon nigroviridis ENSTNIG00000015051 9478 Tarsius syrichta ENSTSYG00000008658
30538 Vicugna pacos ENSVPAG00000009206 8364 Xenopus tropicalis ENSXETG00000007272